| Project Accession: | IBIAP_1000000029 |
| Title: | 3D medical imaging data in head and neck cancer patients |
| Representative Image: |  |
| Description: | The comprehensive dataset specifically includes three-dimensional (3D) medical imaging data acquired from head and neck cancer patients. The primary imaging modality utilized for this collection is Computed Tomography (CT) scanning. CT scans provide detailed cross-sectional images essential for accurate diagnosis, tumor delineation, treatment planning (such as radiation therapy), and monitoring of therapeutic response in oncology. The dataset aims to serve as a high-quality resource for researchers and developers working on projects such as automated tumor segmentation, radiomics analysis, deep learning model training for prognosis prediction, and personalized treatment strategies within the domain of head and neck oncology. The detailed 3D structure captured by the CT scans allows for a more complete and spatial understanding of the disease, moving beyond traditional 2D assessments. |
| Publications: | N/A |
| Associated Codes (URL only): | N/A |
| Funding agency: | N/A |
| Grant Number: | N/A |
| Ethics Statement: | N/A |
| Any Other Information : | N/A |
| Additional File: | N/A |
| Acknowledgments: | The authors acknowledge the Department of Oncoradiology, AIIMS New Delhi, for technical and clinical support. |
| Sr.No | First name | Last name | Organization | Designation | |
|---|---|---|---|---|---|
| 1 | Amit | Gupta | amit.aiims2014@gmail.com | NCI Jhajjar, All India Institute of Medical Sciences (AIIMS), New Delhi, India | Co-Principal Investigator |
| 2 | Krithika | Rangarajan | krithikarangarajan@aiims.edu | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Principal Investigator |
| 3 | Hema | Malhotra | hemamalhotraaiims.2020@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Program Manager |
| 4 | Ashish | Rastogi | ashishrastogi.3150@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Data Analyst |
| 5 | Rohit | Shah | rohitaiims.2024@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | D.E.O |
| Study Accession: | CTS_1000000034 |
| Title: | 3D medical imaging data in head and neck cancer patients |
| Imaging Type: | Computed Tomography (CT) |
| Imaging Sub-type: | Diagnostic Radiology |
| Summary: | The comprehensive dataset specifically includes three-dimensional (3D) medical imaging data acquired from head and neck cancer patients. The primary imaging modality utilized for this collection is Computed Tomography (CT) scanning. CT scans provide detailed cross-sectional images essential for accurate diagnosis, tumor delineation, treatment planning (such as radiation therapy), and monitoring of therapeutic response in oncology. The dataset aims to serve as a high-quality resource for researchers and developers working on projects such as automated tumor segmentation, radiomics analysis, deep learning model training for prognosis prediction, and personalized treatment strategies within the domain of head and neck oncology. The detailed 3D structure captured by the CT scans allows for a more complete and spatial understanding of the disease, moving beyond traditional 2D assessments. |
| Keywords: | Laryngeal cancer; Head and Neck cancer; CT scan |
| Additional / Any Other Information: | N/A |
| Release Date: | April 29, 2026 |
| Access Licence Type: | Open Access |
Table 1. The sample types registered under this study are as follows:
Table 2. The samples registered under this study are as follows:
| Sample Type ID | Organism | Taxon ID | Biological Entity | Laterality | Source Tissue | Source Cell/Cell-line | Cell Organelle |
|---|---|---|---|---|---|---|---|
| CTSMT_10000000064 | Homo sapiens | 9606 | Multiple body regions | Both | N/A | N/A | N/A |
Table 2. The samples registered under this study are as follows:
| Sample Type ID | Sample ID | Subject Type | Clinical Indication (Diagnosis) | ICD-11 Code (patient health condition) | Tumor Site | Image category/label | De-identified Patient ID | Procedure | Clinical Information |
|---|---|---|---|---|---|---|---|---|---|
| CTSMT_10000000064 | CTSM_10000297888 | Head and neck cancer | Known case of cancer - Followup | 2B64 | Oral cavity- floor of the mouth | N/A | Patient_253 | CECT of Head Face-Neck-Chest | Ca floor of mouth |
| CTSMT_10000000064 | CTSM_10000297704 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity- Buccal mucosa | N/A | Patient_69 | CECT of Face & Neck and Chest | K/c/o carcinoma; right buccal mucosa |
| CTSMT_10000000064 | CTSM_10000297901 | Head and neck cancer | Known case of cancer - Followup | 2B68 | Submandibular gland | N/A | Patient_266 | CECT of Face & Neck. | f/u/c o ca right submandibular gland post excision. Follow up imaging. Clinically NAD. |
| CTSMT_10000000064 | CTSM_10000298093 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity- left buccal mucosa | N/A | Patient_458 | CECT of Face-Neck-Chest | Ca left buccal mucosa - post Sx RT |
| CTSMT_10000000064 | CTSM_10000298491 | Head and neck cancer | Known case of cancer - Followup | N/A | Face (soft tissue tumour) | N/A | Patient_856 | CECT of Head-Face-Neck-Chest | k/c/o paramanyeal RMS (glabella), post chemo, post RT in 2016, loss to follow up for 1 year |
| CTSMT_10000000064 | CTSM_10000297904 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity (left GBS) | N/A | Patient_269 | CECT of Face-Neck-Chest | C/o CA lower GBS post 4 cycles of chemotherapy |
| CTSMT_10000000064 | CTSM_10000298494 | Head and neck cancer | Known case of cancer - Followup | 2B62 | Oral cavity (tongue) with and recurrent disease | N/A | Patient_859 | CECT of Face-Neck-Chest | C/o Ca tongue post partial glossectomy and PORT. Now c/o swelling in cheek. |
| CTSMT_10000000064 | CTSM_10000297907 | Head and neck cancer | Known case of cancer - Followup | 2B6C | Hypopharynx- (Pyriform sinus) | N/A | Patient_272 | CECT of Face-Neck-Chest | CA PFS, cT2N1Mo, post CTRT |
| CTSMT_10000000064 | CTSM_10000298497 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity (left lower alveolus) with and recurrent disease | N/A | Patient_862 | CECT of Face-Neck-Chest | CA left lower alveolus post RT. On follow up. |
| CTSMT_10000000064 | CTSM_10000297713 | Head and neck cancer | Known case of cancer - Followup | 2B6A | Oropharynx | N/A | Patient_78 | CECT of Face & Neck. | K/c/o Ca oropharynx post palliative CTRT. |
| CTSMT_10000000064 | CTSM_10000297916 | Head and neck cancer | Known case of cancer - Followup | 2B6B | Nasopharynx | N/A | Patient_281 | CECT of Face-Neck-Chest | k/c/o metastatic nasopharyngeal carcinoma. |
| CTSMT_10000000064 | CTSM_10000298506 | Head and neck cancer | Known case of cancer - Followup | 2B62 | Oral cavity- right lateral border of tongue | N/A | Patient_871 | CECT of Face & Neck. | Ca right lateral border of tongue - post surgery, post RT - last dose in Jan 2025Both Orbits: Normal |
| CTSMT_10000000064 | CTSM_10000297919 | Head and neck cancer | Known case of cancer - Followup | 2C23 | Larynx- glottis | N/A | Patient_284 | CECT of Face-Neck-Chest | k/c/o glottis, cT3N0Mo |
| CTSMT_10000000064 | CTSM_10000297722 | Head and neck cancer | Known case of cancer - Followup | 2B6C | Hypopharynx (right pyriform fossa) | N/A | Patient_87 | CECT of Face, Neck, Chest. | Ca Hypopharynx post palliative RT completed |
| CTSMT_10000000064 | CTSM_10000297943 | Head and neck cancer | N/A | N/A | N/A | N/A | Patient_308 | CECT of Face-Neck-Chest | PNET, post op status |
| CTSMT_10000000064 | CTSM_10000298541 | Head and neck cancer | Known case of cancer - Followup | 2C20 | Nasal cavity | N/A | Patient_906 | CECT of Face-Neck-Chest | sinonasal adenoid cystic carcinoma Ct4N0mx, Post op /RT on follow up |
| CTSMT_10000000064 | CTSM_10000297758 | Head and neck cancer | Known case of cancer - Followup | 2B6B | Nasopharynx | N/A | Patient_123 | CECT of Face, Neck & Chest | Carcinoma nasopharynx on NACT followed by CTRT |
| CTSMT_10000000064 | CTSM_10000298544 | Head and neck cancer | Known case of cancer - Followup | 2B69 | Oropharynx(right tonsil) | N/A | Patient_909 | CECT of Face-Neck-Chest | Ca Right tonsil - definitive RT - last dose on 1-8-24 |
| CTSMT_10000000064 | CTSM_10000297962 | Head and neck cancer | Suspicious of malignancy | 2B6B | Nasopharynx with extensions | N/A | Patient_327 | CECT of Head, Face & Neck | c/o keratin positive giant cell rich tumour (sinonasal and anterior cranial fossa) |
| CTSMT_10000000064 | CTSM_10000298068 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity (RMT) | N/A | Patient_433 | CECT of Face-Neck-Chest | Carcinoma of RMT |
Table 3. The experiment types registered under this study are as follows:
| Experiment Type ID | Instrument Name | Instrument Type | Manufacturer | Model |
|---|---|---|---|---|
| CTET_10000000030 | CT-Scan Machine | Multisclice | Siemens Healthineers | Somatom Definition Edge |
| Experimental Design Summary (CTET_10000000030) |
|---|
| The CT scans included in this dataset were performed for patients diagnosed with head and neck cancer at our institute. The CT images include various body regions including face, neck, chest, abdomen and pelvis. These scans were performed at various stages of management of the cancer, including pre-treatment scans, post-radiotherapy response assessment scans, and post-operative follow-up scans. All the scans were double reported by two radiologists - first, a resident radiologist (3-6 years of experience), and second reading by a specialist onco-radiologist (more than 10 years of experience). |
| Acquired Images Annotation Description (CTET_10000000030) |
|---|
| Each CT scan in the dataset is accompanied by the summary of main findings in the corresponding radiology reports. All the scans were double reported by two radiologists - first, a resident radiologist (3-6 years of experience), and second reading by a specialist onco-radiologist (more than 10 years of experience). The findings from these reports provided in this dataset, are robust scan-level labels for each of the CT exams included in the dataset. Image and pixel-level annotations are not included in this dataset. |
Table 4. The experiments registered under this study are as follows:
| Sample ID | Experiment Type ID | Experiment ID | Image type (Original / Derived / Unknown) | Any Other Information | Image plane | Slice Progression Direction | Slice thickness (in mm) | Image Count | Contrast / Bolus ingredient | Image file format | Image modality type (contrast-enhanced or non-contrast) | Implants or devices visible in scan (yes/no) | Motion artifacts noted (yes/no) | Type of contrast agent | Use of contrast agent (yes/no) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CTSM_10000298186 | CTET_10000000030 | CTE_10000270713 | Derived | N/A | Axial | superio-inferior | 1 | 972 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298188 | CTET_10000000030 | CTE_10000270715 | Derived | N/A | Axial | superio-inferior | 1 | 960 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298191 | CTET_10000000030 | CTE_10000270718 | Derived | N/A | Axial | superio-inferior | 1 | 829 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298193 | CTET_10000000030 | CTE_10000270720 | Derived | N/A | Axial | superio-inferior | 1 | 1374 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298198 | CTET_10000000030 | CTE_10000270725 | Derived | N/A | Axial | superio-inferior | 1 | 889 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000297995 | CTET_10000000030 | CTE_10000270522 | Derived | N/A | Axial | superio-inferior | 1 | 799 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298060 | CTET_10000000030 | CTE_10000270587 | Derived | N/A | Axial | superio-inferior | 1 | 787 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298093 | CTET_10000000030 | CTE_10000270620 | Derived | N/A | Axial | superio-inferior | 1 | 765 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298129 | CTET_10000000030 | CTE_10000270656 | Derived | N/A | Axial | superio-inferior | 1 | 873 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298164 | CTET_10000000030 | CTE_10000270691 | Derived | N/A | Axial | superio-inferior | 1 | 1431 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298200 | CTET_10000000030 | CTE_10000270727 | Derived | N/A | Axial | superio-inferior | 1 | 879 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298218 | CTET_10000000030 | CTE_10000270745 | Derived | N/A | Axial | superio-inferior | 1 | 885 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298223 | CTET_10000000030 | CTE_10000270750 | Derived | N/A | Axial | superio-inferior | 1 | 732 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298236 | CTET_10000000030 | CTE_10000270763 | Derived | N/A | Axial | superio-inferior | 1 | 834 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298252 | CTET_10000000030 | CTE_10000270779 | Derived | N/A | Axial | superio-inferior | 1 | 831 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298253 | CTET_10000000030 | CTE_10000270780 | Derived | N/A | Axial | superio-inferior | 1 | 841 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298288 | CTET_10000000030 | CTE_10000270815 | Derived | N/A | Axial | superio-inferior | 1 | 891 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298315 | CTET_10000000030 | CTE_10000270842 | Derived | N/A | Axial | superio-inferior | 1 | 956 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298415 | CTET_10000000030 | CTE_10000270942 | Derived | N/A | Axial | superio-inferior | 1 | 960 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298203 | CTET_10000000030 | CTE_10000270730 | Derived | N/A | Axial | superio-inferior | 1 | 1277 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| Experiment ID | Image File Name (with path) | Image Preview | Image Size |
|---|---|---|---|
| CTE_10000270634 | HNC_data/Patient_472.zip |  Download Image |
222M |
| CTE_10000270636 | HNC_data/Patient_474.zip | Download Image |
96M |
| CTE_10000270637 | HNC_data/Patient_475.zip | Download Image |
228M |
| CTE_10000270638 | HNC_data/Patient_476.zip | Download Image |
230M |
| CTE_10000270639 | HNC_data/Patient_477.zip | Download Image |
183M |
| CTE_10000270640 | HNC_data/Patient_478.zip | Download Image |
174M |
| CTE_10000270642 | HNC_data/Patient_480.zip | Download Image |
142M |
| CTE_10000270643 | HNC_data/Patient_481.zip | Download Image |
297M |
| CTE_10000270644 | HNC_data/Patient_482.zip | Download Image |
171M |
| CTE_10000270645 | HNC_data/Patient_483.zip | Download Image |
180M |