| Project Accession: | IBIAP_1000000029 |
| Title: | 3D medical imaging data in head and neck cancer patients |
| Representative Image: |  |
| Description: | The comprehensive dataset specifically includes three-dimensional (3D) medical imaging data acquired from head and neck cancer patients. The primary imaging modality utilized for this collection is Computed Tomography (CT) scanning. CT scans provide detailed cross-sectional images essential for accurate diagnosis, tumor delineation, treatment planning (such as radiation therapy), and monitoring of therapeutic response in oncology. The dataset aims to serve as a high-quality resource for researchers and developers working on projects such as automated tumor segmentation, radiomics analysis, deep learning model training for prognosis prediction, and personalized treatment strategies within the domain of head and neck oncology. The detailed 3D structure captured by the CT scans allows for a more complete and spatial understanding of the disease, moving beyond traditional 2D assessments. |
| Publications: | N/A |
| Associated Codes (URL only): | N/A |
| Funding agency: | N/A |
| Grant Number: | N/A |
| Ethics Statement: | N/A |
| Any Other Information : | N/A |
| Additional File: | N/A |
| Acknowledgments: | The authors acknowledge the Department of Oncoradiology, AIIMS New Delhi, for technical and clinical support. |
| Sr.No | First name | Last name | Organization | Designation | |
|---|---|---|---|---|---|
| 1 | Amit | Gupta | amit.aiims2014@gmail.com | NCI Jhajjar, All India Institute of Medical Sciences (AIIMS), New Delhi, India | Co-Principal Investigator |
| 2 | Krithika | Rangarajan | krithikarangarajan@aiims.edu | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Principal Investigator |
| 3 | Hema | Malhotra | hemamalhotraaiims.2020@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Program Manager |
| 4 | Ashish | Rastogi | ashishrastogi.3150@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Data Analyst |
| 5 | Rohit | Shah | rohitaiims.2024@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | D.E.O |
| Study Accession: | CTS_1000000034 |
| Title: | 3D medical imaging data in head and neck cancer patients |
| Imaging Type: | Computed Tomography (CT) |
| Imaging Sub-type: | Diagnostic Radiology |
| Summary: | The comprehensive dataset specifically includes three-dimensional (3D) medical imaging data acquired from head and neck cancer patients. The primary imaging modality utilized for this collection is Computed Tomography (CT) scanning. CT scans provide detailed cross-sectional images essential for accurate diagnosis, tumor delineation, treatment planning (such as radiation therapy), and monitoring of therapeutic response in oncology. The dataset aims to serve as a high-quality resource for researchers and developers working on projects such as automated tumor segmentation, radiomics analysis, deep learning model training for prognosis prediction, and personalized treatment strategies within the domain of head and neck oncology. The detailed 3D structure captured by the CT scans allows for a more complete and spatial understanding of the disease, moving beyond traditional 2D assessments. |
| Keywords: | Laryngeal cancer; Head and Neck cancer; CT scan |
| Additional / Any Other Information: | N/A |
| Release Date: | April 29, 2026 |
| Access Licence Type: | Open Access |
Table 1. The sample types registered under this study are as follows:
Table 2. The samples registered under this study are as follows:
| Sample Type ID | Organism | Taxon ID | Biological Entity | Laterality | Source Tissue | Source Cell/Cell-line | Cell Organelle |
|---|---|---|---|---|---|---|---|
| CTSMT_10000000064 | Homo sapiens | 9606 | Multiple body regions | Both | N/A | N/A | N/A |
Table 2. The samples registered under this study are as follows:
| Sample Type ID | Sample ID | Subject Type | Clinical Indication (Diagnosis) | ICD-11 Code (patient health condition) | Tumor Site | Image category/label | De-identified Patient ID | Procedure | Clinical Information |
|---|---|---|---|---|---|---|---|---|---|
| CTSMT_10000000064 | CTSM_10000298378 | Head and neck cancer | Suspicious of malignancy | 2B60 | Oral cavity (lip) | N/A | Patient_743 | CECT of Face-Neck-Chest | ulceroproliferative growth involving left lower lip |
| CTSMT_10000000064 | CTSM_10000298384 | Head and neck cancer | Known case of cancer - Followup | 2B67 | Sinus - Maxilla with and recurrent disease | N/A | Patient_749 | CECT of Face & Neck. | C/o ca right maxilla - post-op and RT |
| CTSMT_10000000064 | CTSM_10000298387 | Head and neck cancer | Known case of cancer - Followup | 2C33 | Eye (left upper eyelid) | N/A | Patient_752 | CECT of Face-Neck | Sebaceous carcinoma left upper eyelid, with recurrence in left parotid (December 2024) - Post -op,PORT IN Feb 2025 |
| CTSMT_10000000064 | CTSM_10000298394 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity (right buccal mucosa,right RMT) with and recurrent disease | N/A | Patient_759 | N/A | CA buccal mucosa for staging |
| CTSMT_10000000064 | CTSM_10000298400 | Head and neck cancer | Suspicious of malignancy | 2B66 | Oral cavity (right lower alveolus) | N/A | Patient_765 | CECT of Face-Neck-Chest | CA right lower alveolus (3x2 cms UPG over the right molar teeth involving the right GBS.FOR and RMT free ) |
| CTSMT_10000000064 | CTSM_10000298410 | Head and neck cancer | Known case of cancer - Followup | 2D04 | Orbit (right superior orbit with extensions)with and recurrent disease | N/A | Patient_775 | CECT of Head, Orbit, Face, Neck and Chest. | Right Orbital ERMS |
| CTSMT_10000000064 | CTSM_10000298414 | Head and neck cancer | Known case of cancer - Followup | 2B6A | Oropharynx | N/A | Patient_779 | CECT of Face & Neck, Chest | Ca oropharynx post CT and palliative RT. Last dose - 4-4-25 |
| CTSMT_10000000064 | CTSM_10000298420 | Head and neck cancer | Known case of cancer - Followup | 2C33 | Skin- sebaceous gland with and recurrent disease | N/A | Patient_785 | CECT of Head, Neck, Chest, Abdomen & Pelvis. | C/o sebaceous gland carcinoma post multiple lines of treatment - for responce assessment |
| CTSMT_10000000064 | CTSM_10000298426 | Head and neck cancer | Suspicious of malignancy | 2B66 | Oral cavity- Left buccal mucosa & RMT | N/A | Patient_791 | CECT of Face - Neck - Chest | C/O carcinoma left RMT. T2N1M0 |
| CTSMT_10000000064 | CTSM_10000298432 | Head and neck cancer | Known case of cancer - Followup | N/A | Primary tumour site- NA | N/A | Patient_797 | CECT of Neck, Chest, Abdomen & Pelvis and Left Thigh | B NHL, off treatment |
| CTSMT_10000000064 | CTSM_10000298444 | Head and neck cancer | Known case of cancer - Followup | 2C23 | Larynx- glottis with and recurrent disease | N/A | Patient_809 | CECT of Face-Neck-Chest | CA Glottis (T3N0M0) with paraglottic extension |
| CTSMT_10000000064 | CTSM_10000298450 | Head and neck cancer | Known case of cancer - Followup | N/A | Temporal bone | N/A | Patient_815 | CECT of Head and Face-Neck | F/U/C/A Sq CA Left temporal region of scalp. S/p WLE and PORT in march 2024. C/O persistent pain in head.O/E - NAD |
| CTSMT_10000000064 | CTSM_10000298456 | Head and neck cancer | Known case of cancer - Followup | 2B69 | Oropharynx- left tonsil | N/A | Patient_821 | CECT of Face, Neck, Chest | Ca oropharynx (left tonsil) - post radical CTRT - last dose 23-1-25 - 1st follow-up |
| CTSMT_10000000064 | CTSM_10000298457 | Head and neck cancer | Known case of cancer - Followup | 2B69 | Oropharynx (Tonsil) | N/A | Patient_822 | CECT of Face-Neck-Chest | Carcinoma tonsil and Carcinoma lung - post CTRT for tonsil - for response assesment |
| CTSMT_10000000064 | CTSM_10000298459 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity- right lower GBS | N/A | Patient_824 | CECT of Face-Neck-Chest | Ca right lower GBS - post WLE + marginal mandibulectomy and RT - completed in May 2024. |
| CTSMT_10000000064 | CTSM_10000298465 | Head and neck cancer | Suspicious of malignancy | 2B60 | Oral cavity (lip) | N/A | Patient_830 | CECT face and neck and chest | Left buccal mucosa and lip CA planned for surgery |
| CTSMT_10000000064 | CTSM_10000298468 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity (lower lip) | N/A | Patient_833 | CECT of Face-Neck-Chest | CA lower lip pT4aN3b post CT RT |
| CTSMT_10000000064 | CTSM_10000298474 | Head and neck cancer | Known case of cancer - Followup | N/A | Unkown primary site | N/A | Patient_839 | CECT of Face, Neck and Chest | C/O parameningeal rhabdomyosarcoma, post Sx and post RT, on follow up |
| CTSMT_10000000064 | CTSM_10000298480 | Head and neck cancer | Known case of cancer - Followup | 2B67 | Parotid gland | N/A | Patient_845 | CECT of Face & Neck. | F/U/CO Ca left parotid gland(pT4No with perineural invasion), S/P surgery and adjuvant chemotherapy,now c/o headache |
| CTSMT_10000000064 | CTSM_10000298483 | Head and neck cancer | Known case of cancer - Followup | 2B61 | Oropharynx (base of the tongue) with and recurrent disease | N/A | Patient_848 | CECT of Face, Neck and chest | Ca BOT post RT, On OMT, To look for response |
Table 3. The experiment types registered under this study are as follows:
| Experiment Type ID | Instrument Name | Instrument Type | Manufacturer | Model |
|---|---|---|---|---|
| CTET_10000000030 | CT-Scan Machine | Multisclice | Siemens Healthineers | Somatom Definition Edge |
| Experimental Design Summary (CTET_10000000030) |
|---|
| The CT scans included in this dataset were performed for patients diagnosed with head and neck cancer at our institute. The CT images include various body regions including face, neck, chest, abdomen and pelvis. These scans were performed at various stages of management of the cancer, including pre-treatment scans, post-radiotherapy response assessment scans, and post-operative follow-up scans. All the scans were double reported by two radiologists - first, a resident radiologist (3-6 years of experience), and second reading by a specialist onco-radiologist (more than 10 years of experience). |
| Acquired Images Annotation Description (CTET_10000000030) |
|---|
| Each CT scan in the dataset is accompanied by the summary of main findings in the corresponding radiology reports. All the scans were double reported by two radiologists - first, a resident radiologist (3-6 years of experience), and second reading by a specialist onco-radiologist (more than 10 years of experience). The findings from these reports provided in this dataset, are robust scan-level labels for each of the CT exams included in the dataset. Image and pixel-level annotations are not included in this dataset. |
Table 4. The experiments registered under this study are as follows:
| Sample ID | Experiment Type ID | Experiment ID | Image type (Original / Derived / Unknown) | Any Other Information | Image plane | Slice Progression Direction | Slice thickness (in mm) | Image Count | Contrast / Bolus ingredient | Image file format | Image modality type (contrast-enhanced or non-contrast) | Implants or devices visible in scan (yes/no) | Motion artifacts noted (yes/no) | Type of contrast agent | Use of contrast agent (yes/no) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CTSM_10000298358 | CTET_10000000030 | CTE_10000270885 | Derived | N/A | Axial | superio-inferior | 1 | 771 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298359 | CTET_10000000030 | CTE_10000270886 | Derived | N/A | Axial | superio-inferior | 1 | 667 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298360 | CTET_10000000030 | CTE_10000270887 | Derived | N/A | Axial | superio-inferior | 1 | 827 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298361 | CTET_10000000030 | CTE_10000270888 | Derived | N/A | Axial | superio-inferior | 1 | 755 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298362 | CTET_10000000030 | CTE_10000270889 | Derived | N/A | Axial | superio-inferior | 1 | 794 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298364 | CTET_10000000030 | CTE_10000270891 | Derived | N/A | Axial | superio-inferior | 1 | 780 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298366 | CTET_10000000030 | CTE_10000270893 | Derived | N/A | Axial | superio-inferior | 1 | 915 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298367 | CTET_10000000030 | CTE_10000270894 | Derived | N/A | Axial | superio-inferior | 1 | 719 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298368 | CTET_10000000030 | CTE_10000270895 | Derived | N/A | Axial | superio-inferior | 1 | 778 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298369 | CTET_10000000030 | CTE_10000270896 | Derived | N/A | Axial | superio-inferior | 1 | 761 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298370 | CTET_10000000030 | CTE_10000270897 | Derived | N/A | Axial | superio-inferior | 1 | 881 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298371 | CTET_10000000030 | CTE_10000270898 | Derived | N/A | Axial | superio-inferior | 1 | 839 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298372 | CTET_10000000030 | CTE_10000270899 | Derived | N/A | Axial | superio-inferior | 1 | 367 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298373 | CTET_10000000030 | CTE_10000270900 | Derived | N/A | Axial | superio-inferior | 1 | 507 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298374 | CTET_10000000030 | CTE_10000270901 | Derived | N/A | Axial | superio-inferior | 1 | 791 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298375 | CTET_10000000030 | CTE_10000270902 | Derived | N/A | Axial | superio-inferior | 1 | 683 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298376 | CTET_10000000030 | CTE_10000270903 | Derived | N/A | Axial | superio-inferior | 1 | 975 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298378 | CTET_10000000030 | CTE_10000270905 | Derived | N/A | Axial | superio-inferior | 1 | 933 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298380 | CTET_10000000030 | CTE_10000270907 | Derived | N/A | Axial | superio-inferior | 1 | 783 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000297775 | CTET_10000000030 | CTE_10000270302 | Derived | N/A | Axial | superio-inferior | 1 | 753 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| Experiment ID | Image File Name (with path) | Image Preview | Image Size |
|---|---|---|---|
| CTE_10000270415 | HNC_data/Patient_253.zip |  Download Image |
195M |
| CTE_10000270416 | HNC_data/Patient_254.zip | Download Image |
180M |
| CTE_10000270417 | HNC_data/Patient_255.zip | Download Image |
198M |
| CTE_10000270418 | HNC_data/Patient_256.zip | Download Image |
179M |
| CTE_10000270419 | HNC_data/Patient_257.zip | Download Image |
260M |
| CTE_10000270421 | HNC_data/Patient_259.zip | Download Image |
176M |
| CTE_10000270422 | HNC_data/Patient_260.zip | Download Image |
178M |
| CTE_10000270423 | HNC_data/Patient_261.zip | Download Image |
187M |
| CTE_10000270424 | HNC_data/Patient_262.zip | Download Image |
140M |
| CTE_10000270425 | HNC_data/Patient_263.zip | Download Image |
168M |