ISDA: 9OKE

Deposition Date 2025-05-09

Release Date 2026-07-08

Last Version Date 2026-07-08

Entry Detail

PDB ID:

9OKE

Keywords:

DNA BINDING PROTEIN

Title:

Structure of the Bombyx mori bmCENP-HIKM-LN-T-OP complex without the CS module

Biological Source:

Source Organism(s):

Bombyx mori (Taxon ID: 7091)

Expression System(s):

Spodoptera frugiperda

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.24 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:bmCENP-H
Chain IDs:A (auth: H)
Chain Length:239
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R2AFF4

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Centromere protein I
Chain IDs:C (auth: I)
Chain Length:661
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R2LUB8 Pfam ID:PF07778

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:bmCENP-K
Chain IDs:B (auth: K)
Chain Length:219
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R2AP23

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Centromere protein L
Gene (Uniprot):CYP340
Chain IDs:E (auth: L)
Chain Length:302
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:H9IXB1 Pfam ID:PF13092

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Centromere protein M
Gene (Uniprot):101745870
Chain IDs:D (auth: M)
Chain Length:180
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R2ARQ0 Pfam ID:PF11111

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:bmCENP-N
Chain IDs:F (auth: N)
Chain Length:328
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R1WGT7

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Centromere protein O
Chain IDs:G (auth: O)
Chain Length:325
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R2AFZ4

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:bmCENP-P
Chain IDs:H (auth: P)
Chain Length:638
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R1WGN9

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:bmCENP-T
Chain IDs:I (auth: T)
Chain Length:1016
Number of Molecules:1
Biological Source:Bombyx mori

UniProt ID:A0A8R2HRP3

Ligand Molecules

Primary Citation

Architecture and function of holocentric CENP-A-independent inner kinetochores.

Yu, C, Sankaranarayanan, S.R, Cornilleau, G, Howes, A.C, Azumaya, C.M, Day, E.S, Zilberleyb, I, Brillantes, B, Cheung, T.K, Dec, L, Loew, D, Tran, P, Rose, C.M, Drinnenberg, I.A, Ciferri, C, Yatskevich, S.Show

Sci Adv 12 eaeb5817 eaeb5817 (2026)

PMID: 42319948 DOI: 10.1126/sciadv.aeb5817

Primary Citation of related structures

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