ISDA: 9O03

Deposition Date 2025-04-01

Release Date 2026-04-15

Last Version Date 2026-04-15

Entry Detail

PDB ID:

9O03

Keywords:

HYDROLASE, LYASE/DNA

Title:

Crystal structure of AfOgg1:8OG-DNA duplex in a product-bound state

Biological Source:

Source Organism(s):

Archaeoglobus fulgidus (Taxon ID: 2234)
synthetic construct (Taxon ID: 32630)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.00 Å

R-Value Free:

0.25

R-Value Work:

0.21

R-Value Observed:

0.22

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:8-oxoguanine DNA glycosylase/
Chain IDs:A
Chain Length:203
Number of Molecules:1
Biological Source:Archaeoglobus fulgidus

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*AP*CP*CP*TP*GP*CP
Chain IDs:C (auth: B)
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*TP*GP*CP*AP*GP*GP*
Chain IDs:D (auth: C)
Chain Length:15
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*AP*GP*TP*CP(PU
Chain IDs:B (auth: D)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct

Modified Residue