ISDA: 27CK

Deposition Date 2026-05-26

Release Date 2026-10-28

Last Version Date 2026-10-28

Entry Detail

PDB ID:

27CK

Keywords:

MOTOR PROTEIN

Title:

Cryo-EM structure of the Vo domain of bafilomycin A1-bound V-ATPase from rat brain, state 1

Biological Source:

Source Organism(s):

Rattus norvegicus (Taxon ID: 10116)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.11 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase 116 kDa
Gene (Uniprot):Atp6v0a1
Chain IDs:O (auth: a)
Chain Length:464
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:P25286

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:ATPase, H+ transporting, V0 s
Gene (Uniprot):Atp6v0b
Chain IDs:A (auth: b)
Chain Length:203
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:B0K022

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6ap1
Chain IDs:B (auth: c)
Chain Length:204
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:O54715

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6v0d1
Chain IDs:C (auth: d)
Chain Length:348
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q5M7T6

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6v0e2
Chain IDs:D (auth: e)
Chain Length:37
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q5EB76

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase 16 kDa p
Gene (Uniprot):Atp6v0c
Chain IDs:E (auth: g), F (auth: h), G (auth: i), H (auth: j), I (auth: k), J (auth: l), K (auth: m), L (auth: n), M (auth: o)
Chain Length:150
Number of Molecules:9
Biological Source:Rattus norvegicus

UniProt ID:P63081

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Renin receptor cytoplasmic fr
Gene (Uniprot):Atp6ap2
Chain IDs:N (auth: q)
Chain Length:51
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q6AXS4

Ligand Molecules

WEV

Primary Citation

Cryo-EM structure of the Vo domain of bafilomycin A1-bound V-ATPase from rat brain, state 1

Nishida, Y, Yokoyama, K.Show

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