25YT image
Deposition Date 2026-04-23
Release Date 2026-10-28
Last Version Date 2026-10-28
Entry Detail
PDB ID:
25YT
Keywords:
MOTOR PROTEIN
Title:
Cryo-EM structure of the Vo domain of Concanamycin A-bound V-ATPase from rat brain, state 1-1
Biological Source:
Source Organism(s):
Rattus norvegicus (Taxon ID: 10116)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.05 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
25YT validation report missing
Macromolecular Entities
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6v1f
Chain IDs:A (auth: L)
Chain Length:119
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:P50408
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6ap1
Chain IDs:D (auth: P)
Chain Length:463
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:O54715
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase 116 kDa
Gene (Uniprot):Atp6v0a1
Chain IDs:B (auth: a)
Chain Length:838
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:P25286
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase 21 kDa p
Gene (Uniprot):Atp6v0b
Chain IDs:C (auth: b)
Chain Length:205
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:B0K022
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6v0d1
Chain IDs:E (auth: d)
Chain Length:351
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:Q5M7T6
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6v0e2
Chain IDs:F (auth: e)
Chain Length:81
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:Q5EB76
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribonuclease K
Gene (Uniprot):Rnasek
Chain IDs:G (auth: f)
Chain Length:98
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:D3ZIM6
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase 16 kDa p
Gene (Uniprot):Atp6v0c
Chain IDs:H (auth: g), I (auth: h), J (auth: i), K (auth: j), L (auth: k), M (auth: l), N (auth: m), O (auth: n), P (auth: o)
Chain Length:155
Number of Molecules:9
Biological Source:Rattus norvegicus
UniProt ID:P63081
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Renin receptor
Gene (Uniprot):Atp6ap2
Chain IDs:Q (auth: p)
Chain Length:350
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:Q6AXS4
Ligand Molecules
A1MGD
Primary Citation
Cryo-EM structure of the Vo domain of Concanamycin A-bound V-ATPase from rat brain, state 1-1
To Be Published ? ? ? (?)
Primary Citation of related structures
25YT
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