Structural Superimposition

Target ID & Chain

Source ID & Chain

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Structural Entry Filters:

Organisms
- Saccharomyces cerevisiae (4,849)
- Saccharomyces cerevisiae (strain atcc 204508 / s288c) (1,249)
- Saccharomyces cerevisiae s288c (1,036)
- Synthetic construct (480)
- Homo sapiens (385)
- Xenopus laevis (111)
- Escherichia coli (53)
- Mus musculus (50)
- Saccharomyces cerevisiae (strain yjm789) (40)
- Saccharomyces cerevisiae by4741 (36)
- Oryctolagus cuniculus (32)
- Saccharomyces cerevisiae w303 (28)
- Escherichia coli k-12 (23)
- Taura syndrome virus (20)
- Escherichia coli (strain k12) (20)
- Kluyveromyces lactis (20)
- Saccharomyces cerevisiae (strain rm11-1a) (19)
- Escherichia coli bl21(de3) (15)
- Saccharomyces cerevisiae atcc 204508 / s288c (14)
- Schistosoma japonicum (12)
- Bos taurus (12)
- Vicugna pacos (11)
- Kluyveromyces lactis nrrl y-1140 (11)
- Burkholderia pseudomallei (10)
- Aequorea victoria (9)
Methods
- X-RAY DIFFRACTION (4,589)
- ELECTRON MICROSCOPY (1,963)
- SOLUTION NMR (411)
- ELECTRON CRYSTALLOGRAPHY (5)
- NEUTRON DIFFRACTION (4)
- SOLUTION SCATTERING (3)
Years
- 2026 (292)
- 2025 (347)
- 2024 (284)
- 2023 (307)
- 2022 (609)
- 2021 (277)
- 2020 (403)
- 2019 (316)
- 2018 (266)
- 2017 (306)
- 2016 (320)
- 2015 (302)
- 2014 (257)
- 2013 (253)
- 2012 (236)
- 2011 (222)
- 2010 (232)
- 2009 (173)
- 2008 (225)
- 2007 (181)
- 2006 (225)
- 2005 (112)
- 2004 (144)
- 2003 (111)
- 2002 (87)
Symmetry
- P 1 (1,867)
- P 21 21 21 (920)
- P 1 21 1 (910)
- C 1 2 1 (831)
- P 43 21 2 (219)
- C 2 2 21 (203)
- P 21 21 2 (173)
- P 32 2 1 (140)
- P 41 21 2 (84)
- P 31 2 1 (81)
- I 2 2 2 (78)
- P 65 2 2 (54)
- H 3 2 (48)
- P 61 (42)
- P 43 2 2 (40)
- P 65 (39)
- P 61 2 2 (36)
- H 3 (30)
- I 41 2 2 (29)
- P 2 21 21 (29)
- I 4 2 2 (25)
- P 63 2 2 (24)
- P 42 21 2 (23)
- P 21 3 (23)
- P 31 (21)
Ligands
- ADP (426)
- ATP (337)
- HEM (286)
- MES (189)
- PO4 (180)
- EDO (177)
- GTP (172)
- GDP (103)
- HEC (97)
- ACT (84)
- GNP (83)
- AGS (83)
- NAG (82)
- FAD (79)
- SF4 (78)
- ANP (74)
- BEF (74)
- PEG (56)
- FMN (48)
- SPD (42)
- MPD (42)
- OHX (38)
- FES (31)
- IHP (30)
- NAD (29)
Resolution
- <1 (6)
- 1.0 - 1.5 (273)
- 1.5 - 2.0 (1,278)
- 2.0 - 2.5 (1,233)
- 2.5 - 3.0 (1,154)
- 3.0 - 3.5 (570)
- 3.5 - 4.0 (211)
- 4.0 - 4.5 (65)
- 4.5 - 5.0 (30)
- >5 (76)
Modified Residue
- MSE (273)
- SEP (59)
- M3L (44)
- PSU (43)
- DDE (39)
- 5MC (38)
- OMG (37)
- OMC (36)
- TPO (34)
- ALY (34)
- HIC (31)
- BRU (31)
- 1MA (30)
- ASN (29)
- A2M (25)
- OMU (25)
- CME (22)
- CSO (20)
- 5MU (20)
- H2U (19)
- 5CT (17)
- 2MG (17)
- 7MG (16)
- M2G (15)
- MA6 (12)

Search Count: 6,968

All Selected

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9T25

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Yeast Core M6A Methyltransferase Complex (Ycmtc)

Organism: Saccharomyces cerevisiae s288c, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Resolution:2.62 Å Release Date: 2026-10-21
Classification: RNA BINDING PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9T25

Organism: Saccharomyces cerevisiae s288c, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-21

Structural Superimposition 3D-Fold Search Interaction Explorer

9T3B

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Yeast Core M6A Methyltransferase Complex (Ycmtc) Bound To Mrna

Organism: Saccharomyces cerevisiae s288c, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Resolution:2.69 Å Release Date: 2026-10-21
Classification: RNA BINDING PROTEIN
Ligands: ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9T3B

Organism: Saccharomyces cerevisiae s288c, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-21
Ligands: ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

9PBY

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Tfiih Of Pic-Med-Swi/Snf-Nucleosome

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Classification: TRANSCRIPTION/DNA
Ligands: SF4, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PBY

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Ligands: SF4, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

9PBZ

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Polii/Tfiif Of Pic-Med-Swi/Snf-Nucleosome

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Classification: TRANSCRIPTION
Ligands: ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PBZ

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Ligands: ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer

9PCR

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Tail Of Mediator Of Pic-Med-Swi/Snf

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Classification: TRANSCRIPTION

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PCR

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14

Structural Superimposition 3D-Fold Search Interaction Explorer

9PDR

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Composite Map Of Pic-Med-Swi/Snf-Nucleosome

Organism: Saccharomyces cerevisiae, Xenopus laevis
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Classification: TRANSCRIPTION/DNA
Ligands: SF4, ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PDR

Organism: Saccharomyces cerevisiae, Xenopus laevis
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Ligands: SF4, ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer

9X4K

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A Local Refined Structure For Sld7 In Complex With Dbf4-Bound Mcm6

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Resolution:3.25 Å Release Date: 2026-10-14
Classification: REPLICATION

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9X4K

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14

Structural Superimposition 3D-Fold Search Interaction Explorer

9X4L

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Cdc45 And Sld3 Loading On Mcm Double Hexamer

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Resolution:3.50 Å Release Date: 2026-10-14
Classification: REPLICATION
Ligands: ATP, MG, ZN, ADP

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9X4L

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Ligands: ATP, MG, ZN, ADP

Structural Superimposition 3D-Fold Search Interaction Explorer

9X4M

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Sld3-Ctd Docking On Mcm4-Ntd-A

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Resolution:3.15 Å Release Date: 2026-10-14
Classification: REPLICATION
Ligands: ATP, MG, ZN, ADP

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9X4M

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Ligands: ATP, MG, ZN, ADP

Structural Superimposition 3D-Fold Search Interaction Explorer

11SS

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Cryo-Em Structure Of Dna Polymerase Zeta With Rna:Dna Hybrid And Incoming Dntp

Organism: Saccharomyces cerevisiae, Synthetic construct
Method: ELECTRON MICROSCOPY
Resolution:3.03 Å Release Date: 2026-10-07
Classification: DNA BINDING PROTEIN/DNA/RNA
Ligands: CA, DCP, SF4

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

11SS

Organism: Saccharomyces cerevisiae, Synthetic construct
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Ligands: CA, DCP, SF4

Structural Superimposition 3D-Fold Search Interaction Explorer

9PBD

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Polii/Tfiif Of Pic-Med-Swi/Snf

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: TRANSCRIPTION
Ligands: ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PBD

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Ligands: ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer

9PBI

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Extra Med5/16 Of Pic-Med-Swi/Snf

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: TRANSCRIPTION

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PBI

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07

Structural Superimposition 3D-Fold Search Interaction Explorer

9PBS

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Core Swi/Snf Of Pic-Med-Swi/Snf-Nucleosome

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: TRANSCRIPTION

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PBS

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07

Structural Superimposition 3D-Fold Search Interaction Explorer

9PBT

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Arp Of Swi/Snf Of Pic-Med-Swi/Snf-Nucleosome

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: TRANSCRIPTION

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PBT

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07

Structural Superimposition 3D-Fold Search Interaction Explorer

9PC7

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Core Mediator Of Pic-Med-Swi/Snf-Nucleosome

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: TRANSCRIPTION

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9PC7

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07

Structural Superimposition 3D-Fold Search Interaction Explorer

10QX

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Cryo-Em Structure Of Rad1-Rad10

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Classification: DNA BINDING PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

10QX

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30

Structural Superimposition 3D-Fold Search Interaction Explorer

10QY

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Cryo-Em Structure Of The Rad1-Rad10-Saw1 Complex

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Classification: DNA BINDING PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

10QY

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30

Structural Superimposition 3D-Fold Search Interaction Explorer

36WI

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Mevalonate Kinase From Saccharomyces Cerevisiae

Organism: Saccharomyces cerevisiae
Method: X-RAY DIFFRACTION
Resolution:2.15 Å Release Date: 2026-09-30
Classification: TRANSFERASE
Ligands: EDO, GOL

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

36WI

Organism: Saccharomyces cerevisiae
Method: X-RAY DIFFRACTION
Release Date: 2026-09-30
Ligands: EDO, GOL

Structural Superimposition 3D-Fold Search Interaction Explorer

36WJ

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Mevalonate Kinase From Saccharomyces Cerevisiae With Isopentenyl Pyrophosphate (Ipp) Bound

Organism: Saccharomyces cerevisiae
Method: X-RAY DIFFRACTION
Resolution:2.07 Å Release Date: 2026-09-30
Classification: TRANSFERASE
Ligands: MG, IPE, EDO

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

36WJ

Organism: Saccharomyces cerevisiae
Method: X-RAY DIFFRACTION
Release Date: 2026-09-30
Ligands: MG, IPE, EDO

Structural Superimposition 3D-Fold Search Interaction Explorer

36WK

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Mevalonate Kinase From Saccharomyces Cerevisiae With Dimethylallyl Pyrophosphate (Dmapp) Bound

Organism: Saccharomyces cerevisiae
Method: X-RAY DIFFRACTION
Resolution:1.93 Å Release Date: 2026-09-30
Classification: TRANSFERASE
Ligands: MG, DMA, TAR, EDO

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

36WK

Organism: Saccharomyces cerevisiae
Method: X-RAY DIFFRACTION
Release Date: 2026-09-30
Ligands: MG, DMA, TAR, EDO

Structural Superimposition 3D-Fold Search Interaction Explorer

Protein Functional Filters:

Enzyme
- Hydrolases (1,702)
- Transferases (1,408)
- Oxidoreductases (588)
- Translocases (190)
- Lyases (142)
- Isomerases (140)
- Ligases (115)
Uniprots
- P33334 (434)
- P32357 (401)
- P21243 (379)
- P23639 (378)
- P40303 (378)
- P32379 (378)
- P21242 (377)
- P40302 (376)
- P25451 (374)
- P22141 (374)
- P23638 (372)
- P38624 (370)
- P30656 (365)
- P23724 (364)
- P25043 (363)
- P30657 (363)
- P20435 (325)
- P20434 (311)
- P20436 (311)
- P22139 (310)
- P40422 (310)
- P04050 (260)
- P08518 (242)
- P16370 (240)
- P38902 (240)
PFAM
- PF00400 (453)
- PF12134 (426)
- PF20981 (401)
- PF05282 (401)
- PF00227 (384)
- PF10584 (383)
- PF12465 (378)
- PF00467 (346)
- PF01248 (341)
- PF00240 (321)
- PF00623 (299)
- PF04997 (299)
- PF05000 (299)
- PF04998 (299)
- PF04983 (299)
- PF01192 (296)
- PF04560 (294)
- PF04565 (294)
- PF00562 (294)
- PF04563 (294)
- PF04561 (294)
- PF03871 (293)
- PF03870 (293)
- PF01191 (293)
- PF13656 (292)

Structural Entry Filters:

Search Count: 6,968

Protein Functional Filters:

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