Structural Superimposition

Target ID & Chain

Source ID & Chain

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Structural Entry Filters:

Organisms
- Human immunodeficiency virus 1 (2,479)
- Homo sapiens (1,357)
- Human immunodeficiency virus type 1 (227)
- Mus musculus (191)
- Macaca mulatta (179)
- Synthetic construct (176)
- Human enterovirus d68 (93)
- Human immunodeficiency virus type 1 group m subtype b (isolate bh10) (82)
- Human immunodeficiency virus (80)
- Human immunodeficiency virus type 1 bh10 (79)
- Human respiratory syncytial virus (68)
- Human immunodeficiency virus type 1 group m subtype b (68)
- Human spumaretrovirus (62)
- Human herpesvirus 1 (59)
- Human poliovirus 1 (59)
- Human sars coronavirus (57)
- Human herpesvirus 8 (55)
- Human herpesvirus 4 (54)
- Human enterovirus 71 (49)
- Human papillomavirus type 16 (46)
- Human rhinovirus 14 (46)
- Human respiratory syncytial virus a2 (42)
- Human metapneumovirus (41)
- Human betacoronavirus 2c emc/2012 (40)
- Human betaherpesvirus 5 (39)
Methods
- X-RAY DIFFRACTION (3,697)
- ELECTRON MICROSCOPY (1,323)
- SOLUTION NMR (216)
- SOLID-STATE NMR (14)
- NEUTRON DIFFRACTION (6)
- SOLUTION SCATTERING (5)
- ELECTRON CRYSTALLOGRAPHY (3)
Years
- 2026 (273)
- 2025 (346)
- 2024 (277)
- 2023 (397)
- 2022 (293)
- 2021 (251)
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- 2019 (253)
- 2018 (271)
- 2017 (183)
- 2016 (206)
- 2015 (199)
- 2014 (211)
- 2013 (275)
- 2012 (216)
- 2011 (124)
- 2010 (162)
- 2009 (74)
- 2008 (117)
- 2007 (76)
- 2006 (106)
- 2005 (62)
- 2004 (96)
- 2003 (46)
- 2002 (53)
Symmetry
- P 1 (1,226)
- P 21 21 21 (880)
- P 1 21 1 (420)
- C 1 2 1 (389)
- P 21 21 2 (339)
- P 61 (154)
- C 2 2 21 (136)
- P 41 21 2 (131)
- P 31 2 1 (105)
- P 31 (103)
- P 6 (90)
- H 3 (59)
- P 43 21 2 (54)
- P 63 (51)
- P 21 3 (50)
- P 61 2 2 (50)
- P 41 3 2 (46)
- P 32 2 1 (43)
- I 2 2 2 (40)
- P 65 (39)
- H 3 2 (38)
- P 41 (31)
- P 2 21 21 (28)
- P 63 2 2 (27)
- P 43 (22)
Ligands
- NAG (971)
- EDO (249)
- ACT (170)
- PO4 (140)
- DMS (135)
- IOD (77)
- ACY (71)
- 017 (65)
- EPE (61)
- PEG (50)
- MYR (47)
- IHP (44)
- NH4 (35)
- BME (32)
- T27 (29)
- GTP (26)
- SPH (23)
- ROC (23)
- IPA (23)
- MPD (22)
- NVP (22)
- NHE (22)
- 3TL (21)
- DLU (19)
- PLM (18)
Resolution
- <1 (8)
- 1.0 - 1.5 (345)
- 1.5 - 2.0 (1,121)
- 2.0 - 2.5 (951)
- 2.5 - 3.0 (814)
- 3.0 - 3.5 (449)
- 3.5 - 4.0 (137)
- 4.0 - 4.5 (66)
- 4.5 - 5.0 (19)
- >5 (46)
Modified Residue
- ASN (155)
- CSD (47)
- MSE (30)
- CAS (30)
- CAF (29)
- CSO (17)
- TPO (16)
- MRG (14)
- PCA (12)
- ABA (12)
- CGU (10)
- SEP (10)
- CME (7)
- NLE (7)
- ATM (7)
- TYS (6)
- U2X (6)
- OCS (4)
- DOC (4)
- 2DA (4)
- GTP (3)
- THR (3)
- ALY (2)
- PTR (2)
- B3D (2)

Search Count: 5,254

All Selected

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39BB

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Crystal Structure Of Gumh, A Flavin-Dependent Halogenase From The Human Gut Microbiome

Organism: Human metagenome
Method: X-RAY DIFFRACTION
Resolution:2.38 Å Release Date: 2026-10-21
Classification: OXIDOREDUCTASE
Ligands: GOL

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

39BB

Organism: Human metagenome
Method: X-RAY DIFFRACTION
Release Date: 2026-10-21
Ligands: GOL

Structural Superimposition 3D-Fold Search Interaction Explorer

9YPD

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The Ligand Free Hcov-Hku1 Spike Structure Obtained From Data Collected On 100 Kv Tundra At 180Kx Magnification With Falcon C Detector

Organism: Human coronavirus hku1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-21
Classification: VIRAL PROTEIN
Ligands: NAG

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9YPD

Organism: Human coronavirus hku1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-21
Ligands: NAG

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11ON

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Divergent Interfaces And Convergent Outcome In The Structural Basis Of Hiv-2 Vif Antagonism Of Apobec3H

Organism: Pan troglodytes, Homo sapiens, Human immunodeficiency virus 2, Escherichia coli bl21(de3)
Method: ELECTRON MICROSCOPY
Resolution:3.10 Å Release Date: 2026-10-14
Classification: VIRAL PROTEIN
Ligands: ZN

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11ON

Organism: Pan troglodytes, Homo sapiens, Human immunodeficiency virus 2, Escherichia coli bl21(de3)
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-14
Ligands: ZN

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43KN

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Len-Bound Hiv-1 Capsid Lattice Within Vlps Treated With Pfo, C6 Symmetry

Organism: Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: VIRAL PROTEIN

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43KN

Organism: Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07

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43KO

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Len-Unbound Hiv-1 Capsid Lattice Within Vlps Treated With Pfo, C6 Symmetry

Organism: Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

43KO

Organism: Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07

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9XQH

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Len-Bound Hiv-1 Capsid Lattice Within Intact Vlps

Organism: Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XQH

Organism: Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07

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9YIW

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Pc94-A.15 Fab In Complex With Bg505 Sosip Trimer And Rm20A3 Fab

Organism: Homo sapiens, Macaca mulatta, Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Resolution:3.60 Å Release Date: 2026-10-07
Classification: VIRAL PROTEIN
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9YIW

Organism: Homo sapiens, Macaca mulatta, Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Ligands: NAG

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9YJ0

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Pc94-A.16 Fab In Complex With P94_V18_C046 Chimera Ds-Sosip Trimer And Rm20A3 Fab

Organism: Macaca mulatta, Human immunodeficiency virus 1, Homo sapiens
Method: ELECTRON MICROSCOPY
Resolution:3.00 Å Release Date: 2026-10-07
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

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9YJ0

Organism: Macaca mulatta, Human immunodeficiency virus 1, Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Ligands: NAG

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9YJ1

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Pc94-A.31 Fab In Complex With Bg505 Sosip Trimer And Rm20A3 Fab

Organism: Macaca mulatta, Human immunodeficiency virus 1, Homo sapiens
Method: ELECTRON MICROSCOPY
Resolution:3.10 Å Release Date: 2026-10-07
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9YJ1

Organism: Macaca mulatta, Human immunodeficiency virus 1, Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Ligands: NAG

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9YJ2

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Pc94-A.30 Fab In Complex With Bg505 Sosip Trimer And Rm20A3 Fab

Organism: Homo sapiens, Macaca mulatta, Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Resolution:3.10 Å Release Date: 2026-10-07
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

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9YJ2

Organism: Homo sapiens, Macaca mulatta, Human immunodeficiency virus 1
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Ligands: NAG

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9YJ3

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Pc94-A.27 Fab In Complex With P94_V18_C046 Chimera Ds-Sosip Trimer And Rm20A3 Fab

Organism: Homo sapiens, Human immunodeficiency virus 1, Macaca mulatta
Method: ELECTRON MICROSCOPY
Resolution:3.00 Å Release Date: 2026-10-07
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9YJ3

Organism: Homo sapiens, Human immunodeficiency virus 1, Macaca mulatta
Method: ELECTRON MICROSCOPY
Release Date: 2026-10-07
Ligands: NAG

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10IE

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Hsv-2 Ghecto/Gl/Chl2-Fab Complex

Organism: Human alphaherpesvirus 2, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

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10IE

Organism: Human alphaherpesvirus 2, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Ligands: NAG

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10IF

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Hsv-2 Ghecto/Gl/Chl37-Fab Complex

Organism: Human herpesvirus 2 strain hg52, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

10IF

Organism: Human herpesvirus 2 strain hg52, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Ligands: NAG

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10IG

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Hsv-2 Ghecto/Gl/Chl27-Fab Complex

Organism: Human alphaherpesvirus 2, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

10IG

Organism: Human alphaherpesvirus 2, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Ligands: NAG

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10IH

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Hsv-2 Ghecto/Gl/53S-Fab Complex

Organism: Human herpesvirus 2 strain hg52, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

10IH

Organism: Human herpesvirus 2 strain hg52, Mus musculus
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Ligands: NAG

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10LH

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Hsv-2 Ghecto/Gl

Organism: Human alphaherpesvirus 2
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Classification: VIRAL PROTEIN
Ligands: NAG

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10LH

Organism: Human alphaherpesvirus 2
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Ligands: NAG

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9U04

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Lx-2D6 (Fab) - Polio 1 (Vlp) Complex

Organism: Human poliovirus 1 mahoney, Homo sapiens
Method: ELECTRON MICROSCOPY
Resolution:1.70 Å Release Date: 2026-09-30
Classification: VIRUS LIKE PARTICLE
Ligands: PLM, MYR

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9U04

Organism: Human poliovirus 1 mahoney, Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-30
Ligands: PLM, MYR

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9U4D

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Structure Of Ube3A-E6-P53 Complex

Organism: Escherichia coli (strain k12), Human papillomavirus 16, Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-23
Classification: PROTEIN BINDING
Ligands: ZN

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9U4D

Organism: Escherichia coli (strain k12), Human papillomavirus 16, Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-23
Ligands: ZN

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9X9J

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Structure Of Hcov-229E Spike Proteins On Virions By Subtomogram Averaging: Rbd-Closed And S2-Compact

Organism: Human coronavirus 229e
Method: ELECTRON MICROSCOPY
Resolution:4.55 Å Release Date: 2026-09-23
Classification: VIRAL PROTEIN
Ligands: NAG

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9X9J

Organism: Human coronavirus 229e
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-23
Ligands: NAG

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9XH2

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Structure Of The Cx3Cl1.44-Us28-Gqin18-Scfv16 In The E-State

Organism: Homo sapiens, Mus musculus, Human betaherpesvirus 5
Method: ELECTRON MICROSCOPY
Resolution:2.60 Å Release Date: 2026-09-23
Classification: MEMBRANE PROTEIN
Ligands: GDP, CLR

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9XH2

Organism: Homo sapiens, Mus musculus, Human betaherpesvirus 5
Method: ELECTRON MICROSCOPY
Release Date: 2026-09-23
Ligands: GDP, CLR

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Protein Functional Filters:

Enzyme
- Hydrolases (2,483)
- Transferases (2,180)
- Lyases (48)
- Isomerases (32)
- Translocases (4)
- Oxidoreductases (2)
Uniprots
- P03366 (384)
- P03367 (198)
- Q2N0S6 (193)
- P61769 (186)
- P12497 (159)
- P04585 (137)
- Q76353 (104)
- B6DRA0 (77)
- Q68T42 (77)
- P12493 (74)
- P03300 (68)
- P04587 (61)
- Q2N0S5 (59)
- P14350 (57)
- Q8ULI9 (54)
- P01730 (51)
- A0A0M3KKW9 (51)
- P03369 (50)
- P03303 (48)
- P03420 (47)
- Q5RZ08 (39)
- P01892 (35)
- Q5MQD0 (30)
- O38732 (30)
- Q2N0S7 (29)
PFAM
- PF00077 (865)
- PF00516 (464)
- PF00075 (414)
- PF06817 (399)
- PF00078 (399)
- PF06815 (398)
- PF00665 (313)
- PF00517 (307)
- PF07654 (281)
- PF19317 (231)
- PF00607 (194)
- PF00129 (188)
- PF00073 (179)
- PF02226 (134)
- PF00548 (133)
- PF09408 (99)
- PF00523 (95)
- PF01601 (92)
- PF07686 (82)
- PF16451 (79)
- PF19209 (76)
- PF00541 (74)
- PF00680 (57)
- PF00047 (55)
- PF18103 (51)

Structural Entry Filters:

Search Count: 5,254

Protein Functional Filters:

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