9YH6 image
Deposition Date 2025-09-30
Release Date 2026-06-10
Last Version Date 2026-06-10
Entry Detail
PDB ID:
9YH6
Keywords:
MOTOR PROTEIN
Title:
Composite structure of the sheathed flagellar motor in Vibrio cholerae adopting a lower FOMC conformation
Biological Source:
Source Organism(s):
Vibrio cholerae O1 biovar El Tor str. N16961 (Taxon ID: 243277)
Expression System(s):
Vibrio cholerae o1 biovar el tor str. n16961
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.60 Å
Aggregation State:
CELL
Reconstruction Method:
SINGLE PARTICLE
9YH6 validation report missing
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod prot
Gene (Uniprot):VC_2195
Chain IDs:A (auth: Aa), B (auth: Ab), C (auth: Ac), D (auth: Ad), E (auth: Ae), F (auth: Af), G (auth: Ag), H (auth: Ah), I (auth: Ai), J (auth: Aj), K (auth: Ak), L (auth: Al), M (auth: Am), N (auth: An), O (auth: Ao), P (auth: Ap), Q (auth: Aq), R (auth: Ar), S (auth: As), T (auth: At), U (auth: Au), V (auth: Av), W (auth: Aw), X (auth: Ax), Y (auth: Ay), Z (auth: Az), BA (auth: Bb)
Chain Length:262
Number of Molecules:27
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KQ12 Pfam ID:PF00460, PF22692, PF06429
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar basal-body rod prot
Gene (Uniprot):VC_2196
Chain IDs:AA (auth: Ba), CA (auth: Bc), DA (auth: Bd), VA (auth: Bv), WA (auth: Bw)
Chain Length:249
Number of Molecules:5
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KQ11 Pfam ID:PF00460, PF22692, PF06429
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar hook protein FlgE
Gene (Uniprot):VC_2197
Chain IDs:EA (auth: Be), FA (auth: Bf), GA (auth: Bg), HA (auth: Bh), IA (auth: Bi), JA (auth: Bj), KA (auth: Bk), LA (auth: Bl), MA (auth: Bm), NA (auth: Bn), OA (auth: Bo), PA (auth: Bp), QA (auth: Bq), RA (auth: Br), SA (auth: Bs), TA (auth: Bt), UA (auth: Bu)
Chain Length:434
Number of Molecules:17
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KQ10 Pfam ID:PF00460, PF22692, PF07559, PF06429
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar L-ring protein
Gene (Uniprot):flgH
Chain IDs:XA (auth: Bx), YA (auth: By), ZA (auth: Bz), AB (auth: Ca), BB (auth: Cb), CB (auth: Cc), DB (auth: Cd), EB (auth: Ce), FB (auth: Cf), GB (auth: Cg), HB (auth: Ch), IB (auth: Ci), JB (auth: Cj), KB (auth: Ck), LB (auth: Cl), MB (auth: Cm), NB (auth: Cn), OB (auth: Co), PB (auth: Cp), QB (auth: Cq), RB (auth: Cr), SB (auth: Cs), TB (auth: Ct), UB (auth: Cu), VB (auth: Cv), WB (auth: Cw)
Chain Length:227
Number of Molecules:26
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KQ13 Pfam ID:PF02107
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar P-ring protein
Gene (Uniprot):flgI
Chain IDs:XB (auth: Cx), YB (auth: Cy), ZB (auth: Cz), AC (auth: Da), BC (auth: Db), CC (auth: Dc), DC (auth: Dd), EC (auth: De), FC (auth: Df), GC (auth: Dg), HC (auth: Dh), IC (auth: Di), JC (auth: Dj), KC (auth: Dk), LC (auth: Dl), MC (auth: Dm), NC (auth: Dn), OC (auth: Do), PC (auth: Dp), QC (auth: Dq), RC (auth: Dr), SC (auth: Ds), TC (auth: Dt), UC (auth: Du), VC (auth: Dv), WC (auth: Dw)
Chain Length:343
Number of Molecules:26
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KQ14 Pfam ID:PF02119
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Flagellar protein FlgT
Gene (Uniprot):VC_2208
Chain IDs:XC (auth: Dx), YC (auth: Dy), ZC (auth: Dz), AD (auth: Ea), BD (auth: Eb), CD (auth: Ec), DD (auth: Ed), ED (auth: Ee), FD (auth: Ef), GD (auth: Eg), HD (auth: Eh), ID (auth: Ei), JD (auth: Ej), KD (auth: Ek), LD (auth: El), MD (auth: Em), ND (auth: En), OD (auth: Eo), PD (auth: Ep), QD (auth: Eq), RD (auth: Er), SD (auth: Es), TD (auth: Et), UD (auth: Eu), VD (auth: Ev), WD (auth: Ew)
Chain Length:352
Number of Molecules:26
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KPZ9 Pfam ID:PF16548, PF16539, PF16538
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sodium-type flagellar protein
Gene (Uniprot):VC_1008
Chain IDs:XD (auth: Ex), YD (auth: Ey), ZD (auth: Ez), AE (auth: Fa), BE (auth: Fb), CE (auth: Fc), DE (auth: Fd), EE (auth: Fe), FE (auth: Ff), GE (auth: Fg), HE (auth: Fh), IE (auth: Fi), JE (auth: Fj), KE (auth: Fk), LE (auth: Fl), ME (auth: Fm), NE (auth: Fn), OE (auth: Fo), PE (auth: Fp), QE (auth: Fq), RE (auth: Fr), SE (auth: Fs), TE (auth: Ft), UE (auth: Fu), VE (auth: Fv), WE (auth: Fw)
Chain Length:271
Number of Molecules:26
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KT95 Pfam ID:PF18393, PF00691
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sodium-type flagellar protein
Gene (Uniprot):VC_2601
Chain IDs:XE (auth: Fx), YE (auth: Fy), ZE (auth: Fz), AF (auth: Ga), BF (auth: Gb), CF (auth: Gc), DF (auth: Gd), EF (auth: Ge), FF (auth: Gf), GF (auth: Gg), HF (auth: Gh), IF (auth: Gi), JF (auth: Gj), KF (auth: Gk), LF (auth: Gl), MF (auth: Gm), NF (auth: Gn), OF (auth: Go), PF (auth: Gp), QF (auth: Gq), RF (auth: Gr), SF (auth: Gs), TF (auth: Gt), UF (auth: Gu), VF (auth: Gv), WF (auth: Gw)
Chain Length:183
Number of Molecules:26
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KNX9 Pfam ID:PF08238
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FlgP
Chain IDs:XF (auth: Gx), YF (auth: Gy), ZF (auth: Gz), AG (auth: Ha), BG (auth: Hb), CG (auth: Hc), DG (auth: Hd), EG (auth: He), FG (auth: Hf), GG (auth: Hg), HG (auth: Hh), IG (auth: Hi), JG (auth: Hj), KG (auth: Hk), LG (auth: Hl), MG (auth: Hm), NG (auth: Hn), OG (auth: Ho), PG (auth: Hp), QG (auth: Hq), RG (auth: Hr), SG (auth: Hs), TG (auth: Ht), UG (auth: Hu), VG (auth: Hv), WG (auth: Hw), XG (auth: Hx), YG (auth: Hy), ZG (auth: Hz), AH (auth: Ia), BH (auth: Ib), CH (auth: Ic), DH (auth: Id), EH (auth: Ie), FH (auth: If), GH (auth: Ig), HH (auth: Ih), IH (auth: Ii), JH (auth: Ij), KH (auth: Ik), LH (auth: Il), MH (auth: Im), NH (auth: In), OH (auth: Io), PH (auth: Ip), QH (auth: Iq), RH (auth: Ir), SH (auth: Is), TH (auth: It), UH (auth: Iu), VH (auth: Iv), WH (auth: Iw)
Chain Length:12
Number of Molecules:52
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chemotaxis protein PomB
Gene (Uniprot):VC_0893
Chain IDs:XH (auth: Ix), YH (auth: Iy), ZH (auth: Iz), AI (auth: Ja), BI (auth: Jb), CI (auth: Jc), DI (auth: Jd), EI (auth: Je), FI (auth: Jf), GI (auth: Jg), HI (auth: Jh), II (auth: Ji), JI (auth: Jj), KI (auth: Jk), LI (auth: Jl), MI (auth: Jm), NI (auth: Jn), OI (auth: Jo), PI (auth: Jp), QI (auth: Jq), RI (auth: Jr), SI (auth: Js), TI (auth: Jt), UI (auth: Ju), VI (auth: Jv), WI (auth: Jw)
Chain Length:155
Number of Molecules:26
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KTK9 Pfam ID:PF00691
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lipoprotein
Gene (Uniprot):VC_2206
Chain IDs:XI (auth: Jx), YI (auth: Jy), ZI (auth: Jz), AJ (auth: Ka), BJ (auth: Kb), CJ (auth: Kc), DJ (auth: Kd), EJ (auth: Ke), FJ (auth: Kf), GJ (auth: Kg), HJ (auth: Kh), IJ (auth: Ki), JJ (auth: Kj), KJ (auth: Kk), LJ (auth: Kl), MJ (auth: Km), NJ (auth: Kn), OJ (auth: Ko), PJ (auth: Kp), QJ (auth: Kq), RJ (auth: Kr), SJ (auth: Ks), TJ (auth: Kt), UJ (auth: Ku), VJ (auth: Kv), WJ (auth: Kw), XJ (auth: Kx), YJ (auth: Ky), ZJ (auth: Kz), AK (auth: La), BK (auth: Lb), CK (auth: Lc), DK (auth: Ld), EK (auth: Le), FK (auth: Lf), GK (auth: Lg), HK (auth: Lh), IK (auth: Li), JK (auth: Lj), KK (auth: Lk), LK (auth: Ll), MK (auth: Lm), NK (auth: Ln), OK (auth: Lo), PK (auth: Lp), QK (auth: Lq), RK (auth: Lr), SK (auth: Ls), TK (auth: Lt), UK (auth: Lu), VK (auth: Lv), WK (auth: Lw), XK (auth: Lx), YK (auth: Ly), ZK (auth: Lz), AL (auth: Ma), BL (auth: Mb), CL (auth: Mc)
Chain Length:105
Number of Molecules:58
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KQ01
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FlgO domain-containing protei
Gene (Uniprot):VC_2207
Chain IDs:DL (auth: Md), EL (auth: Me), FL (auth: Mf), GL (auth: Mg), HL (auth: Mh), IL (auth: Mi), JL (auth: Mj), KL (auth: Mk), LL (auth: Ml), ML (auth: Mm), NL (auth: Mn), OL (auth: Mo), PL (auth: Mp), QL (auth: Mq), RL (auth: Mr), SL (auth: Ms), TL (auth: Mt), UL (auth: Mu), VL (auth: Mv), WL (auth: Mw), XL (auth: Mx), YL (auth: My), ZL (auth: Mz), AM (auth: Na), BM (auth: Nb), CM (auth: Nc), DM (auth: Nd), EM (auth: Ne), FM (auth: Nf), GM (auth: Ng), HM (auth: Nh), IM (auth: Ni), JM (auth: Nj), KM (auth: Nk), LM (auth: Nl), MM (auth: Nm), NM (auth: Nn), OM (auth: No), PM (auth: Np), QM (auth: Nq), RM (auth: Nr), SM (auth: Ns), TM (auth: Nt), UM (auth: Nu), VM (auth: Nv), WM (auth: Nw), XM (auth: Nx), YM (auth: Ny), ZM (auth: Nz), AN (auth: Oa), BN (auth: Ob), CN (auth: Oc), DN (auth: Od), EN (auth: Oe), FN (auth: Of), GN (auth: Og), HN (auth: Oh), IN (auth: Oi)
Chain Length:190
Number of Molecules:58
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
UniProt ID:Q9KQ00 Pfam ID:PF17680
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FliF
Chain IDs:JN (auth: Oj), KN (auth: Ok), LN (auth: Ol), MN (auth: Om), NN (auth: On), ON (auth: Oo), PN (auth: Op), QN (auth: Oq), RN (auth: Or), SN (auth: Os), TN (auth: Ot), UN (auth: Ou), VN (auth: Ov), WN (auth: Ow), XN (auth: Ox), YN (auth: Oy), ZN (auth: Oz), AO (auth: Pa), BO (auth: Pb), CO (auth: Pc), DO (auth: Pd), EO (auth: Pe), FO (auth: Pf), GO (auth: Pg), HO (auth: Ph), IO (auth: Pi), JO (auth: Pj), KO (auth: Pk), LO (auth: Pl), MO (auth: Pm), NO (auth: Pn), OO (auth: Po), PO (auth: Pp), QO (auth: Pq)
Chain Length:144
Number of Molecules:34
Biological Source:Vibrio cholerae O1 biovar El Tor str. N16961
Ligand Molecules
NA
Primary Citation
In-situ cryo-EM structures reveal mechanisms of sheathed flagellar assembly, rotation, and disassembly in Vibrio cholerae
To Be Published ? ? ? (?)
Primary Citation of related structures
9YH6
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