9YCZ image
Deposition Date 2025-09-20
Release Date 2026-09-23
Last Version Date 2026-09-23
Entry Detail
PDB ID:
9YCZ
Keywords:
TRANSCRIPTION
Title:
RNA polymerase II on Super pause sequence in the sidetracked state
Biological Source:
Source Organism(s):
synthetic construct (Taxon ID: 32630)
Sus scrofa (Taxon ID: 9823)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.90 Å
Aggregation State:
2D ARRAY
Reconstruction Method:
SINGLE PARTICLE
9YCZ validation report missing
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase s
Chain IDs:A
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase s
Chain IDs:B
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase I
Chain IDs:C
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:A0A481DF93
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase I
Chain IDs:D
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:A0A8D1GCS3
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases
Gene (Uniprot):POLR2E
Chain IDs:E
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:A0A4X1VTX4
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases
Chain IDs:F
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase s
Gene (Uniprot):POLR2G
Chain IDs:G
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:A0A4X1VKG7
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases
Gene (Uniprot):POLR2H
Chain IDs:H
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:I3LCB2 Pfam ID:PF03870
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase I
Gene (Uniprot):POLR2I
Chain IDs:I
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:P60899 Pfam ID:PF02150, PF01096
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases
Gene (Uniprot):POLR2L
Chain IDs:J
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:A0A8W4F9W9 Pfam ID:PF01194
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase I
Gene (Uniprot):POLR2J
Chain IDs:K
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:F1RKE4 Pfam ID:PF13656
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerases
Gene (Uniprot):POLR2K
Chain IDs:L
Chain Length:0
Number of Molecules:1
Biological Source:Sus scrofa
UniProt ID:A0A8D0JYF1
Polymer Type:polydeoxyribonucleotide
Molecule:Non-template DNA strand
Chain IDs:M (auth: N)
Chain Length:0
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polyribonucleotide
Molecule:RNA
Chain IDs:N (auth: P)
Chain Length:0
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:Template DNA strand
Chain IDs:O (auth: T)
Chain Length:0
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
MG
ZN
Primary Citation
RNA polymerase II on Super pause sequence in the sidetracked state
To Be Published ? ? ? (?)
Primary Citation of related structures
9YD5
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