9XB2 image
Deposition Date 2025-10-23
Release Date 2026-09-09
Last Version Date 2026-09-09
Entry Detail
PDB ID:
9XB2
Keywords:
Title:
trans-Aconitate Decarboxylase Tad1
Biological Source:
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 2 2 21
Macromolecular Entities
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-like protein SMT3,T
Gene (Uniprot):TAD1, SMT3
Chain IDs:A, B, C, D
Chain Length:599
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c), Mycosarcoma maydis
Primary Citation
Biochemical characterization and molecular mechanism study of trans-aconitate decarboxylase Tad1.
Enzyme.Microb.Technol. 199 110875 110875 (2026)
PMID: 42060999 DOI: 10.1016/j.enzmictec.2026.110875

Abstact

Trans-aconitate decarboxylase (Tad1) catalyzes the conversion of trans-aconitate to itaconate, a compound of growing interest in biotechnology owing to its diverse applications as a platform chemical. Despite this potential, detailed biochemical and mechanistic insights into Tad1 remain incomplete. This study presents the heterologous expression, purification, and comprehensive biochemical characterization of Tad1 from Ustilago maydis. We determined its optimal pH and temperature, and cofactor requirements. Furthermore, we employed X-ray crystallography, molecular docking, and site-directed mutagenesis to elucidate key residues involved in substrate binding and catalysis, thereby establishing a molecular basis for its decarboxylase activity. Elucidating Tad1's catalytic mechanism and active site architecture is essential for overcoming current limitations in itaconate biosynthesis and advancing sustainable chemical production.

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Primary Citation of related structures
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