ISDA: 9VYD

Deposition Date 2025-07-20

Release Date 2026-07-22

Last Version Date 2026-07-22

Entry Detail

PDB ID:

9VYD

Keywords:

TOXIN

Title:

Crystal structure of toxin-antitoxin complex VP14460-VP14465peptide from Vibrio parahaemolyticus

Biological Source:

Source Organism(s):

Vibrio parahaemolyticus (Taxon ID: 670)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.26

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 43 21 2

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Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:DUF1911 domain-containing pro
Gene (Uniprot):tc_PAI_003
Chain IDs:A
Chain Length:327
Number of Molecules:1
Biological Source:Vibrio parahaemolyticus

UniProt ID:A0A024B384

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:VP14465 (PoNe)
Gene (Uniprot):tc_PAI_002
Chain IDs:B
Chain Length:23
Number of Molecules:1
Biological Source:Vibrio parahaemolyticus

UniProt ID:A0A024B2N9

Primary Citation

Structural and mechanistic insights into the VP14460-VP14465 effector-immunity module of the Vibrio parahaemolyticus type VI secretion system.

Zheng, Y, Zheng, C, Ye, Z, Huang, L, Lin, X, Wu, B, Pan, Z, Qiu, R, Cai, J, Xu, L, Deng, Z, Xu, R, Xie, X, Xie, L, Hu, F.Show

J.Biol.Chem. 302 113257 113257 (2026)

PMID: 42297241 DOI: 10.1016/j.jbc.2026.113257

Primary Citation of related structures

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