ISDA: 9TRT

Deposition Date 2025-12-27

Release Date 2026-11-04

Last Version Date 2026-11-04

Entry Detail

PDB ID:

9TRT

Keywords:

RIBOSOME

Title:

Structure of the Plant mitochondrial pre-initiation complex 3, (SSU,mtIF3,mRNA,tRNA)

Biological Source:

Source Organism(s):

Brassica oleracea var. botrytis (Taxon ID: 3715)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.05 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polyribonucleotide
Molecule:18S rRNA
Chain IDs:A (auth: 2)
Chain Length:1601
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Polymer Type:polyribonucleotide
Molecule:initiator tRNA
Chain IDs:B (auth: 5)
Chain Length:77
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Polymer Type:polyribonucleotide
Molecule:mRNA
Chain IDs:C (auth: 6)
Chain Length:5
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Translation initiation factor
Chain IDs:D (auth: 8)
Chain Length:520
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S2
Chain IDs:E (auth: A)
Chain Length:212
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:F (auth: B)
Chain Length:554
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S4
Chain IDs:G (auth: C)
Chain Length:362
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:S5 DRBM domain-containing pro
Chain IDs:H (auth: D)
Chain Length:501
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein bS6m
Chain IDs:I (auth: E)
Chain Length:138
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:J (auth: F)
Chain Length:157
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S8, chl
Chain IDs:K (auth: G)
Chain Length:129
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S9
Chain IDs:L (auth: H)
Chain Length:383
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:M (auth: I)
Chain Length:228
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S11
Chain IDs:N (auth: J)
Chain Length:304
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:O (auth: K)
Chain Length:125
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein uS13m
Chain IDs:P (auth: L)
Chain Length:154
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:Q (auth: M)
Chain Length:155
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:R (auth: N)
Chain Length:414
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S16
Chain IDs:S (auth: O)
Chain Length:136
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:T (auth: P)
Chain Length:110
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:U (auth: Q)
Chain Length:237
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:V (auth: R)
Chain Length:212
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S21
Chain IDs:W (auth: S)
Chain Length:100
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S31, mi
Chain IDs:X (auth: T)
Chain Length:94
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein mS23
Chain IDs:Y (auth: U)
Chain Length:192
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein mS26
Chain IDs:Z (auth: V)
Chain Length:193
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:AA (auth: W)
Chain Length:483
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:RRM domain-containing protein
Chain IDs:BA (auth: X)
Chain Length:496
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:MOSC domain-containing protei
Chain IDs:CA (auth: Y)
Chain Length:102
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal Protein S34, mitoch
Chain IDs:DA (auth: Z)
Chain Length:153
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:EA (auth: a)
Chain Length:424
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:CBS domain-containing protein
Chain IDs:FA (auth: b)
Chain Length:80
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:GA (auth: c)
Chain Length:128
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:IGR domain-containing protein
Chain IDs:HA (auth: d)
Chain Length:110
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein mS45
Chain IDs:IA (auth: e)
Chain Length:383
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein mS47
Chain IDs:JA (auth: f)
Chain Length:410
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:KA (auth: g)
Chain Length:668
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Adenylyl cyclase
Chain IDs:LA (auth: h)
Chain Length:384
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:PROP1-like PPR domain-contain
Chain IDs:MA (auth: i)
Chain Length:725
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:RRM domain-containing protein
Chain IDs:NA (auth: k)
Chain Length:153
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:OA (auth: l)
Chain Length:576
Number of Molecules:1
Biological Source:Brassica oleracea var. botrytis

Modified Residue