9TID image
Deposition Date 2025-12-05
Release Date 2026-05-20
Last Version Date 2026-08-12
Entry Detail
PDB ID:
9TID
Keywords:
Title:
Phage 812 baseplate in the pre-contraction state - core and wedge module proteins
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ORF58
Gene (Uniprot):PhageK_111
Chain IDs:A
Chain Length:848
Number of Molecules:1
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF57
Gene (Uniprot):PhageK_110
Chain IDs:B
Chain Length:295
Number of Molecules:1
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF56
Gene (Uniprot):PhageK_109
Chain IDs:C
Chain Length:808
Number of Molecules:1
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF60
Gene (Uniprot):PhageK_113
Chain IDs:D, E
Chain Length:174
Number of Molecules:2
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF59
Gene (Uniprot):PhageK_112
Chain IDs:F, G
Chain Length:263
Number of Molecules:2
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF61
Gene (Uniprot):PhageK_114
Chain IDs:H, I
Chain Length:234
Number of Molecules:2
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF62
Gene (Uniprot):PhageK_115
Chain IDs:J, K, L, M
Chain Length:348
Number of Molecules:4
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF63
Gene (Uniprot):PhageK_116
Chain IDs:N, O
Chain Length:1019
Number of Molecules:2
Biological Source:Staphylococcus phage 812K1/420
Polymer Type:polypeptide(L)
Molecule:ORF49
Gene (Uniprot):PhageK_100
Chain IDs:P, Q, R, S
Chain Length:587
Number of Molecules:4
Biological Source:Staphylococcus phage 812K1/420
Ligand Molecules
Primary Citation
Conformational changes of the baseplate regulating tail contraction of Staphylococcus phage 812.
Embo J. 45 5514 5536 (2026)
PMID: 42350675 DOI: 10.1038/s44318-026-00834-9

Abstact

Phages with contractile tails employ elaborate mechanisms to penetrate bacterial cell walls and deliver their genomes into the host cytoplasm. Here, we used cryo-EM to show that the baseplate of phage 812, a member of the Kayvirus genus, which infects Gram-positive Staphylococcus strains, is formed of a core, wedge modules, and baseplate arms carrying receptor-binding proteins 1 and 2 and tripod complexes. Upon binding to a host cell, the receptor-binding proteins of phage 812 baseplate reorient and undergo conformational changes. The changes to the tripod complexes trigger the release of the central spike and weld proteins, which expose peptidoglycan-degrading domains of the hub proteins. Changes in the positions of baseplate arms are transmitted through wedge modules to tail sheath initiator proteins. The ring of the tail sheath initiator proteins expands and triggers the contraction of the tail sheath, which shortens to 50% and pushes the tail tube 10-30 nm into the bacterial cytoplasm. Homologous molecular mechanisms are probably shared by phages of the Herelleviridae family with contractile tails to infect Gram-positive bacteria.

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Primary Citation of related structures
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