ISDA: 9S3E

Deposition Date 2025-07-24

Release Date 2026-08-12

Last Version Date 2026-08-12

Entry Detail

PDB ID:

9S3E

Keywords:

PHOTOSYNTHESIS

Title:

Universal Photosystem II Intermediate with Light-Dependent Water-Ferrocyanide Oxydo-reductase activity from Pisum sativum

Biological Source:

Source Organism(s):

Pisum sativum (Taxon ID: 3888)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.10 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II protein D1
Gene (Uniprot):psbA
Chain IDs:A
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P06585 EC:1.10.3.9

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II CP47 reaction
Gene (Uniprot):psbB
Chain IDs:B
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:D5MAL6 Pfam ID:PF00421

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II CP43 reaction
Gene (Uniprot):psbC
Chain IDs:C
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P06004

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II D2 protein
Gene (Uniprot):psbD
Chain IDs:D
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P06006 EC:1.10.3.9

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit alpha
Gene (Uniprot):psbE
Chain IDs:E
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P13554

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit beta
Gene (Uniprot):psbF
Chain IDs:F
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P62096

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction cente
Gene (Uniprot):psbH
Chain IDs:G (auth: H)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:Q9XQR3

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction cente
Gene (Uniprot):psbI
Chain IDs:H (auth: I)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:A0A2S1CE74

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction cente
Gene (Uniprot):psbJ
Chain IDs:I (auth: J)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P13555

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction cente
Gene (Uniprot):psbK
Chain IDs:J (auth: K)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:D5MAJ8

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction cente
Gene (Uniprot):psbL
Chain IDs:K (auth: L)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P60147

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction cente
Gene (Uniprot):psbM
Chain IDs:L (auth: M)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P69529

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Oxygen-evolving enhancer prot
Gene (Uniprot):PSBO
Chain IDs:M (auth: O)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P14226

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Oxygen-evolving enhancer prot
Gene (Uniprot):PSBP
Chain IDs:N (auth: P)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:P16059

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Oxygen-evolving enhancer prot
Gene (Uniprot):psbQ
Chain IDs:O (auth: Q)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:Q7Y1T5 Pfam ID:PF05757

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction cente
Gene (Uniprot):psbT
Chain IDs:P (auth: T)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:Q8HS25

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Photosystem II 5 kDa protein,
Gene (Uniprot):KIW84_074848
Chain IDs:S (auth: U)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:A0A9D4VSA9

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:PSII 6.1 kDa protein
Gene (Uniprot):KIW84_061593
Chain IDs:Q (auth: W)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:A0A9D4W3H0 Pfam ID:PF07123

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ultraviolet-B-repressible pro
Gene (Uniprot):KIW84_040622
Chain IDs:R (auth: X)
Chain Length:0
Number of Molecules:1
Biological Source:Pisum sativum

UniProt ID:A0A9D4X981 Pfam ID:PF06596

Ligand Molecules