9L9C image
Deposition Date 2024-12-30
Release Date 2026-07-15
Last Version Date 2026-07-15
Entry Detail
PDB ID:
9L9C
Keywords:
RIBOSOME
Title:
StateB of archaeal pre-50S ribosome
Biological Source:
Source Organism(s):
Haloferax mediterranei ATCC 33500 (Taxon ID: 523841)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9L9C validation report missing
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:23S RNA
Chain IDs:A (auth: 0)
Chain Length:2916
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
Polymer Type:polyribonucleotide
Molecule:5S RNA
Chain IDs:B (auth: 1)
Chain Length:122
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl39E
Chain IDs:C (auth: A)
Chain Length:50
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R0V8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor
Gene (Uniprot):eif6
Chain IDs:D (auth: B)
Chain Length:221
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R0W0
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl7AE
Chain IDs:E
Chain Length:120
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R865
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplP
Chain IDs:F
Chain Length:176
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R1S5
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl15A
Chain IDs:G
Chain Length:196
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R1Z8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl18A
Chain IDs:H
Chain Length:116
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R8A5
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl18
Chain IDs:I
Chain Length:184
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:P50561
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl19A
Chain IDs:J
Chain Length:151
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P1
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl21R
Chain IDs:K
Chain Length:96
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R877
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl22P
Chain IDs:L
Chain Length:153
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q4
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl24A
Chain IDs:M
Chain Length:67
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R867
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl24P
Chain IDs:N
Chain Length:118
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl30P
Chain IDs:O
Chain Length:154
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7N8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl31R
Chain IDs:P
Chain Length:92
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R0V9
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl32
Chain IDs:Q
Chain Length:234
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P2
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl37AR
Chain IDs:R
Chain Length:89
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R290
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl37E
Chain IDs:S
Chain Length:58
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R849
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl44E
Chain IDs:T
Chain Length:93
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R2C4
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl2P
Chain IDs:U
Chain Length:241
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q6
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplC
Chain IDs:V
Chain Length:338
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q9
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl4LP
Chain IDs:W
Chain Length:248
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl5
Chain IDs:X
Chain Length:172
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:P50557
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplF
Chain IDs:Y
Chain Length:178
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P3
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplJ
Chain IDs:Z
Chain Length:344
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R884
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:CBS domain-containing protein
Gene (Uniprot):C439_17118
Chain IDs:FA (auth: a)
Chain Length:406
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:M0INN0
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl13P
Chain IDs:AA (auth: b)
Chain Length:145
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R8A4
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplW
Chain IDs:BA (auth: c)
Chain Length:83
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q7
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmC
Chain IDs:CA (auth: d)
Chain Length:70
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q2
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplX
Chain IDs:DA (auth: e)
Chain Length:58
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R0W1
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl14P
Chain IDs:EA (auth: f)
Chain Length:132
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P9
Ligand Molecules
AMP
MG
ZN
Primary Citation
StateB of archaeal pre-50S ribosome
To Be Published ? ? ? (?)
Primary Citation of related structures
9L9C
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