9JZR image
Deposition Date 2024-10-14
Release Date 2026-02-25
Last Version Date 2026-09-23
Entry Detail
PDB ID:
9JZR
Keywords:
Title:
Structure of PSI-LHCI-LHCII supercomplex from Bryopsis corticulans
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
2.73 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:A (auth: 0)
Chain Length:245
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:B (auth: 1), E (auth: 5)
Chain Length:226
Number of Molecules:2
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:C (auth: 2)
Chain Length:256
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:D (auth: 3)
Chain Length:281
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:F (auth: 6)
Chain Length:267
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:G (auth: 7)
Chain Length:264
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:H (auth: 8), GA (auth: 4)
Chain Length:248
Number of Molecules:2
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding prote
Chain IDs:I (auth: 9)
Chain Length:222
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyl
Chain IDs:J (auth: A)
Chain Length:751
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:photosystem I
Chain IDs:K (auth: B)
Chain Length:734
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur cen
Chain IDs:S (auth: C)
Chain Length:81
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Chain IDs:L (auth: D)
Chain Length:198
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:PsaE
Chain IDs:M (auth: E)
Chain Length:91
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Chain IDs:N (auth: F)
Chain Length:236
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:PsaG
Chain IDs:O (auth: G)
Chain Length:167
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:PsaH
Chain IDs:DA (auth: H)
Chain Length:133
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Chain IDs:P (auth: I)
Chain Length:36
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Chain IDs:Q (auth: J)
Chain Length:41
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:PsaK
Chain IDs:T (auth: K)
Chain Length:123
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:PSI subunit V
Chain IDs:R (auth: L)
Chain Length:204
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Gene (Uniprot):psaM
Chain IDs:U (auth: M)
Chain Length:32
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:PsaO
Chain IDs:V (auth: O)
Chain Length:137
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Lhcb-a
Chain IDs:W (auth: a), CA (auth: h)
Chain Length:250
Number of Molecules:2
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Lhcb-b
Chain IDs:Y (auth: b)
Chain Length:251
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Lhcb-c
Chain IDs:X (auth: c)
Chain Length:254
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Lhcb-d
Chain IDs:Z (auth: d), BA (auth: g)
Chain Length:280
Number of Molecules:2
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Lhcb-e
Chain IDs:FA (auth: e)
Chain Length:250
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Lhcb-f
Chain IDs:AA (auth: f)
Chain Length:259
Number of Molecules:1
Biological Source:Bryopsis corticulans
Polymer Type:polypeptide(L)
Molecule:Lhcb-i
Chain IDs:EA (auth: i)
Chain Length:282
Number of Molecules:1
Biological Source:Bryopsis corticulans
Primary Citation
Cryo-EM structural analyses of chlorophyll b-enriched PSI-LHC and PSII-LHC supercomplexes of the siphonous green alga Bryopsis corticulans.
Plant Commun. 7 101738 101738 (2026)
PMID: 41578646 DOI: 10.1016/j.xplc.2026.101738

Abstact

The light-harvesting complexes of photosystem I (PSI) and PSII (LHCI and LHCII) in Bryopsis corticulans (B. corticulans) are homologous to those in Chlamydomonas reinhardtii and land plants but exhibit a distinct chlorophyll (Chl) and carotenoid composition. Here, we report cryo-electron microscopy structures of the PSI-LHCI(10)-LHCII(9) supercomplex, comprising three LHCII trimers, and the C(2)S(2)M(2)N(2)-type PSII-LHCII supercomplex from B. corticulans. In the PSI supercomplex, ten LHCI subunits assemble into two belts and one heterodimer, coordinating a total of 86 Chl a and 65 Chl b molecules (Chl a/b ratio of 1.3, compared with 3.4 in C. reinhardtii), as well as 18 siphonaxanthin, 2 siphonein, and 13 alpha-carotene molecules. Of the three LHCII trimers bound to the PSI-LHCI supercomplex, two are anchored to the PSI core primarily via phosphorylated subunits, whereas the third, non-phosphorylated trimer is stabilized through interactions with Lhca-d and the adjacent LHCII trimer. In the C(2)S(2)M(2)N(2)-type PSII-LHCII supercomplex, the N-LHCII is positioned closer to the PSII core than in C. reinhardtii, likely owing to loss of the linker motif in the N-terminal region of B. corticulans CP29. Structure-based energy transfer analysis suggests that this spatial rearrangement enhances the efficiency of excitation energy transfer from N-LHCII to the PSII core. Collectively, these findings reveal structural adaptations that underlie the acclimation strategies of siphonous green algae inhabiting intertidal environments.

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