6KIG image
Deposition Date 2019-07-18
Release Date 2020-02-12
Last Version Date 2026-09-16
Entry Detail
PDB ID:
6KIG
Keywords:
Title:
Structure of cyanobacterial photosystem I-IsiA supercomplex
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
2.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Iron stress-induced chlorophy
Gene (Uniprot):isiA
Chain IDs:L (auth: 1), M (auth: 2), N (auth: 3), O (auth: 4), P (auth: 5), Q (auth: 6), CA (auth: Y), DA (auth: Z), EA (auth: a), FA (auth: b), GA (auth: c), HA (auth: d), TA (auth: q), UA (auth: r), VA (auth: s), WA (auth: t), XA (auth: u), YA (auth: v)
Chain Length:342
Number of Molecules:18
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyl
Gene (Uniprot):psaA
Chain IDs:A, R (auth: G), IA (auth: e)
Chain Length:763
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyl
Gene (Uniprot):psaB
Chain IDs:B, S (auth: H), JA (auth: f)
Chain Length:734
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur cen
Gene (Uniprot):psaC
Chain IDs:C, T (auth: N), KA (auth: g)
Chain Length:81
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Gene (Uniprot):Synpcc7942_1002
Chain IDs:D, U (auth: O), LA (auth: h)
Chain Length:141
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Gene (Uniprot):psaE
Chain IDs:E, V (auth: Q), MA (auth: i)
Chain Length:75
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Gene (Uniprot):Synpcc7942_1250
Chain IDs:F, W (auth: R), NA (auth: j)
Chain Length:159
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I PsaI protein
Gene (Uniprot):psaI
Chain IDs:G (auth: I), X (auth: S), OA (auth: k)
Chain Length:38
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Gene (Uniprot):psaJ
Chain IDs:H (auth: J), Y (auth: T), PA (auth: l)
Chain Length:41
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Gene (Uniprot):psaK
Chain IDs:I (auth: K), Z (auth: U), QA (auth: m)
Chain Length:84
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center
Gene (Uniprot):psaL
Chain IDs:J (auth: L), AA (auth: V), RA (auth: n)
Chain Length:166
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Polymer Type:polypeptide(L)
Molecule:PsaM
Chain IDs:K (auth: M), BA (auth: W), SA (auth: o)
Chain Length:29
Number of Molecules:3
Biological Source:Synechococcus elongatus (strain PCC 7942)
Primary Citation
Structural basis for energy and electron transfer of the photosystem I-IsiA-flavodoxin supercomplex.
Nat.Plants 6 167 176 (2020)
PMID: 32042157 DOI: 10.1038/s41477-020-0593-7

Abstact

Under iron-deficiency stress, which occurs frequently in natural aquatic environments, cyanobacteria reduce the amount of iron-enriched proteins, including photosystem I (PSI) and ferredoxin (Fd), and upregulate the expression of iron-stress-induced proteins A and B (IsiA and flavodoxin (Fld)). Multiple IsiAs function as the peripheral antennae that encircle the PSI core, whereas Fld replaces Fd as the electron receptor of PSI. Here, we report the structures of the PSI3-IsiA18-Fld3 and PSI3-IsiA18 supercomplexes from Synechococcus sp. PCC 7942, revealing features that are different from the previously reported PSI structures, and a sophisticated pigment network that involves previously unobserved pigment molecules. Spectroscopic results demonstrated that IsiAs are efficient light harvesters for PSI. Three Flds bind symmetrically to the trimeric PSI core-we reveal the detailed interaction and the electron transport path between PSI and Fld. Our results provide a structural basis for understanding the mechanisms of light harvesting, energy transfer and electron transport of cyanobacterial PSI under stressed conditions.

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