4CRN image
Deposition Date 2014-02-28
Release Date 2014-07-23
Last Version Date 2024-05-08
Entry Detail
PDB ID:
4CRN
Keywords:
Title:
Cryo-EM of a pretermination complex with eRF1 and eRF3
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
9.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ERF3 IN RIBOSOME BOUND ERF1-E
Gene (Uniprot):SUP35
Chain IDs:A (auth: P)
Chain Length:430
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ERF1 IN RIBOSOME-BOUND ERF1-E
Gene (Uniprot):SUP45
Chain IDs:B (auth: X)
Chain Length:437
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Ligand Molecules
Primary Citation
Cryoelectron Microscopic Structures of Eukaryotic Translation Termination Complexes Containing Erf1-Erf3 or Erf1-Abce1.
Cell Rep. 8 59 ? (2014)
PMID: 25001285 DOI: 10.1016/J.CELREP.2014.04.058

Abstact

Termination and ribosome recycling are essential processes in translation. In eukaryotes, a stop codon in the ribosomal A site is decoded by a ternary complex consisting of release factors eRF1 and guanosine triphosphate (GTP)-bound eRF3. After GTP hydrolysis, eRF3 dissociates, and ABCE1 can bind to eRF1-loaded ribosomes to stimulate peptide release and ribosomal subunit dissociation. Here, we present cryoelectron microscopic (cryo-EM) structures of a pretermination complex containing eRF1-eRF3 and a termination/prerecycling complex containing eRF1-ABCE1. eRF1 undergoes drastic conformational changes: its central domain harboring the catalytically important GGQ loop is either packed against eRF3 or swung toward the peptidyl transferase center when bound to ABCE1. Additionally, in complex with eRF3, the N-terminal domain of eRF1 positions the conserved NIKS motif proximal to the stop codon, supporting its suggested role in decoding, yet it appears to be delocalized in the presence of ABCE1. These results suggest that stop codon decoding and peptide release can be uncoupled during termination.

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Primary Citation of related structures
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