10SD image
Deposition Date 2026-02-05
Release Date 2026-06-17
Last Version Date 2026-06-17
Entry Detail
PDB ID:
10SD
Keywords:
Title:
The cryoEM structure of T10 type2 nanofiber
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
3.11 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T10 type 2 nanofiber
Chain IDs:A (auth: B), B (auth: C), C (auth: D), D (auth: E), E (auth: F), F (auth: G), G (auth: H), H (auth: I), I (auth: J), J (auth: K), K (auth: L), L (auth: M), M (auth: O), N (auth: P), O (auth: Q), P (auth: A)
Chain Length:11
Number of Molecules:16
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Tailoring Avidity through Morphology: Structure-Avidity Relationship in CD38-Binding Nanofiber Radiotracers.
Acs Appl Bio Mater 9 4242 4257 (2026)
PMID: 42011845 DOI: 10.1021/acsabm.6c00348

Abstact

The lack of targeted molecular imaging agents for multiple myeloma (MM) hinders precise disease characterization and theranostic development. We address this by engineering a tunable platform of self-assembled peptide nanofibers that target CD38, a key antigen in MM. Simple variation of a conjugated lipid tail length (C4-C12) dictates the supramolecular architecture, as revealed by high-resolution cryo-EM. This structural control directly modulates biological function: avidity for CD38 increases monotonically with tail length, culminating in T12 nanofibers with sub-nanomolar affinity. This optimized morphology also enables unique pH-responsive di-tyrosine cross-linking and, critically, facilitates polyvalent cell-surface engagement that outcompetes high-affinity monomers in vitro. The nanofibers are efficiently radiolabeled with (64)Cu, exhibit exceptional serum stability, and show no toxicity at doses 20-fold above projected imaging use. By establishing lipid tail length as a simple, powerful handle for controlling nanofiber structure, avidity, and function, we present a robust, translatable platform for advancing targeted imaging and therapy in CD38-positive malignancies.

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Chemical

Disease

Primary Citation of related structures
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