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Structural Superimposition

Target ID & Chain

Source ID & Chain

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Structural Entry Filters:

Organisms
- Cricket paralysis virus (18)
- Homo sapiens (10)
- Oryctolagus cuniculus (8)
- Kluyveromyces lactis (3)
- Rattus norvegicus (2)
- Escherichia coli (2)
- Severe acute respiratory syndrome coronavirus 2 (1)
- Saccharomyces cerevisiae p283 (1)
- Saccharomyces cerevisiae (strain atcc 204508 / s288c) (1)
Methods
- ELECTRON MICROSCOPY (16)
- X-RAY DIFFRACTION (2)
Years
- 2024 (4)
- 2022 (2)
- 2020 (3)
- 2018 (3)
- 2016 (2)
- 2015 (2)
- 2014 (1)
- 1999 (1)
Symmetry
- P 1 (16)
- P 21 21 21 (1)
- I 2 2 2 (1)
Ligands
- GTP (1)
- SER (1)
- GCP (1)
- 6EM (1)
Resolution
- 2.0 - 2.5 (1)
- 2.5 - 3.0 (1)
- 3.0 - 3.5 (2)
- 3.5 - 4.0 (2)
- >5 (2)

Search Count: 18

All Selected

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9G8M

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Human 80S Ribosome Bound By A Ski2-Exosome Complex

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-23
Classification: RIBOSOME
Ligands: MG, ZN

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9G8M

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-23
Ligands: MG, ZN

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9G8N

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80S-Bound Human Ski2-Exosome Complex

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-16
Classification: RIBOSOME

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9G8N

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-16

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9G8O

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Human 40S Ribosome Bound By A Ski238-Exosome Complex

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-16
Classification: RIBOSOME

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9G8O

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-16

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9G8P

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40S-Bound Human Ski2-Exosome Complex

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-16
Classification: RIBOSOME

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9G8P

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2024-10-16

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7ZJW

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Rabbit 80S Ribosome As It Decodes The Sec-Uga Codon

Organism: Homo sapiens, Cricket paralysis virus, Rattus norvegicus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-19
Classification: RIBOSOME
Ligands: GTP, SER, MG, K, ZN, NA

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7ZJW

Organism: Homo sapiens, Cricket paralysis virus, Rattus norvegicus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-19
Ligands: GTP, SER, MG, K, ZN, NA

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7ZJX

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Rabbit 80S Ribosome Programmed With Secis And Sbp2

Organism: Homo sapiens, Cricket paralysis virus, Rattus norvegicus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2022-09-07
Classification: RIBOSOME
Ligands: ZN

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7ZJX

Organism: Homo sapiens, Cricket paralysis virus, Rattus norvegicus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2022-09-07
Ligands: ZN

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7JQC

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Sars-Cov-2 Nsp1, Crpv Ires And Rabbit 40S Ribosome Complex

Organism: Severe acute respiratory syndrome coronavirus 2, Oryctolagus cuniculus, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2020-12-02
Classification: RIBOSOME/VIRAL PROTEIN

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7JQC

Organism: Severe acute respiratory syndrome coronavirus 2, Oryctolagus cuniculus, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2020-12-02

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6W2S

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Structure Of The Cricket Paralysis Virus 5-Utr Ires (Crpv 5-Utr-Ires) Bound To The Small Ribosomal Subunit In The Open State (Class 1)

Organism: Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Resolution:3.47 Å Release Date: 2020-04-22
Classification: Ribosome/TRANSLATION
Ligands: MG, ZN

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6W2S

Organism: Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2020-04-22
Ligands: MG, ZN

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6W2T

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Structure Of The Cricket Paralysis Virus 5-Utr Ires (Crpv 5-Utr-Ires) Bound To The Small Ribosomal Subunit In The Closed State (Class 2)

Organism: Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Resolution:3.36 Å Release Date: 2020-04-22
Classification: RIBOSOME
Ligands: MG, ZN

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6W2T

Organism: Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2020-04-22
Ligands: MG, ZN

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6C3R

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Cricket Paralysis Virus Rnai Suppressor Protein Crpv-1A

Organism: Cricket paralysis virus
Method: X-RAY DIFFRACTION
Resolution:2.60 Å Release Date: 2018-10-17
Classification: VIRAL PROTEIN

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6C3R

Organism: Cricket paralysis virus
Method: X-RAY DIFFRACTION
Release Date: 2018-10-17

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6D90

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Mammalian 80S Ribosome With A Double Translocated Crpv-Ires, P-Site Trna And Erf1.

Organism: Homo sapiens, Escherichia coli, Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2018-06-06
Classification: RIBOSOME

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6D90

Organism: Homo sapiens, Escherichia coli, Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2018-06-06

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6D9J

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Mammalian 80S Ribosome With A Double Translocated Crpv-Ires, P-Sitetrna And Erf1.

Organism: Homo sapiens, Escherichia coli, Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2018-06-06
Classification: RIBOSOME
Ligands: ZN, MG

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6D9J

Organism: Homo sapiens, Escherichia coli, Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2018-06-06
Ligands: ZN, MG

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5IT7

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Structure Of The Kluyveromyces Lactis 80S Ribosome In Complex With The Cricket Paralysis Virus Ires And Eef2

Organism: Cricket paralysis virus, Saccharomyces cerevisiae p283, Kluyveromyces lactis, Saccharomyces cerevisiae (strain atcc 204508 / s288c)
Method: ELECTRON MICROSCOPY
Release Date: 2016-05-18
Classification: RIBOSOME
Ligands: MG, ZN, GCP, 6EM

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5IT7

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5IT9

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Structure Of The Yeast Kluyveromyces Lactis Small Ribosomal Subunit In Complex With The Cricket Paralysis Virus Ires.

Organism: Cricket paralysis virus, Kluyveromyces lactis
Method: ELECTRON MICROSCOPY
Resolution:3.80 Å Release Date: 2016-05-18
Classification: RIBOSOME
Ligands: MG, ZN

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5IT9

Organism: Cricket paralysis virus, Kluyveromyces lactis
Method: ELECTRON MICROSCOPY
Release Date: 2016-05-18
Ligands: MG, ZN

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4D61

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Cryo-Em Structures Of Ribosomal 80S Complexes With Termination Factors And Cricket Paralysis Virus Ires Reveal The Ires In The Translocated State

Organism: Homo sapiens, Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Resolution:9.00 Å Release Date: 2015-03-04
Classification: RIBOSOME

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4D61

Organism: Homo sapiens, Cricket paralysis virus, Oryctolagus cuniculus
Method: ELECTRON MICROSCOPY
Release Date: 2015-03-04

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4D5N

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Cryo-Em Structures Of Ribosomal 80S Complexes With Termination Factors And Cricket Paralysis Virus Ires Reveal The Ires In The Translocated State

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Resolution:9.00 Å Release Date: 2015-02-04
Classification: RIBOSOME/RNA

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4D5N

Organism: Homo sapiens, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2015-02-04

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4V92

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Kluyveromyces Lactis 80S Ribosome In Complex With Crpv-Ires

Organism: Kluyveromyces lactis, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Resolution:3.70 Å Release Date: 2014-07-09
Classification: RIBOSOME

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4V92

Organism: Kluyveromyces lactis, Cricket paralysis virus
Method: ELECTRON MICROSCOPY
Release Date: 2014-07-09

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1B35

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Cricket Paralysis Virus (Crpv)

Organism: Cricket paralysis virus
Method: X-RAY DIFFRACTION
Resolution:2.40 Å Release Date: 1999-08-09
Classification: VIRUS

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1B35

Organism: Cricket paralysis virus
Method: X-RAY DIFFRACTION
Release Date: 1999-08-09

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Protein Functional Filters:

Enzyme
- Lyases (10)
- Hydrolases (9)
- Transferases (2)
Uniprots
- G1T8A2 (7)
- G1SS70 (7)
- G1TNM3 (7)
- G1SVB0 (7)
- B7NZS8 (7)
- G1TRM4 (7)
- G1SFR8 (7)
- G1U0Q2 (7)
- G1SGX4 (7)
- G1TU13 (7)
- G1SIZ2 (7)
- G1TG89 (7)
- G1SZ47 (7)
- 8895506 (6)
- G1U7M4 (5)
- G1TPV3 (5)
- G1TDB3 (5)
- G1TIB4 (5)
- G1TFM5 (5)
- G1SK22 (5)
- G1TM55 (5)
- G1SJB4 (5)
- G1TJW1 (5)
- G1TPG3 (5)
- G1TN62 (5)
PFAM
- PF08069 (12)
- PF00177 (12)
- PF00467 (12)
- PF00410 (12)
- PF00366 (12)
- PF01248 (12)
- PF01015 (12)
- PF01201 (12)
- PF01092 (12)
- PF01479 (12)
- PF00189 (12)
- PF00203 (12)
- PF01200 (12)
- PF00338 (12)
- PF07650 (12)
- PF03501 (12)
- PF03297 (12)
- PF00833 (12)
- PF00411 (12)
- PF00416 (12)
- PF01667 (12)
- PF00400 (12)
- PF16205 (12)
- PF04758 (12)
- PF00380 (12)

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Indian Biological Data Centre, Regional Centre for Biotechnology, NCR Biotech Science Cluster, 3rd Milestone

Faridabad-Gurugram Expressway, Faridabad - 121 001

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