| Project Accession: | IBIAP_1000000029 |
| Title: | 3D medical imaging data in head and neck cancer patients |
| Representative Image: |  |
| Description: | The comprehensive dataset specifically includes three-dimensional (3D) medical imaging data acquired from head and neck cancer patients. The primary imaging modality utilized for this collection is Computed Tomography (CT) scanning. CT scans provide detailed cross-sectional images essential for accurate diagnosis, tumor delineation, treatment planning (such as radiation therapy), and monitoring of therapeutic response in oncology. The dataset aims to serve as a high-quality resource for researchers and developers working on projects such as automated tumor segmentation, radiomics analysis, deep learning model training for prognosis prediction, and personalized treatment strategies within the domain of head and neck oncology. The detailed 3D structure captured by the CT scans allows for a more complete and spatial understanding of the disease, moving beyond traditional 2D assessments. |
| Publications: | N/A |
| Associated Codes (URL only): | N/A |
| Funding agency: | N/A |
| Grant Number: | N/A |
| Ethics Statement: | N/A |
| Any Other Information : | N/A |
| Additional File: | N/A |
| Acknowledgments: | The authors acknowledge the Department of Oncoradiology, AIIMS New Delhi, for technical and clinical support. |
| Sr.No | First name | Last name | Organization | Designation | |
|---|---|---|---|---|---|
| 1 | Amit | Gupta | amit.aiims2014@gmail.com | NCI Jhajjar, All India Institute of Medical Sciences (AIIMS), New Delhi, India | Co-Principal Investigator |
| 2 | Krithika | Rangarajan | krithikarangarajan@aiims.edu | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Principal Investigator |
| 3 | Hema | Malhotra | hemamalhotraaiims.2020@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Program Manager |
| 4 | Ashish | Rastogi | ashishrastogi.3150@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | Data Analyst |
| 5 | Rohit | Shah | rohitaiims.2024@gmail.com | All India Institute of Medical Sciences (AIIMS), New Delhi, India | D.E.O |
| Study Accession: | CTS_1000000034 |
| Title: | 3D medical imaging data in head and neck cancer patients |
| Imaging Type: | Computed Tomography (CT) |
| Imaging Sub-type: | Diagnostic Radiology |
| Summary: | The comprehensive dataset specifically includes three-dimensional (3D) medical imaging data acquired from head and neck cancer patients. The primary imaging modality utilized for this collection is Computed Tomography (CT) scanning. CT scans provide detailed cross-sectional images essential for accurate diagnosis, tumor delineation, treatment planning (such as radiation therapy), and monitoring of therapeutic response in oncology. The dataset aims to serve as a high-quality resource for researchers and developers working on projects such as automated tumor segmentation, radiomics analysis, deep learning model training for prognosis prediction, and personalized treatment strategies within the domain of head and neck oncology. The detailed 3D structure captured by the CT scans allows for a more complete and spatial understanding of the disease, moving beyond traditional 2D assessments. |
| Keywords: | Laryngeal cancer; Head and Neck cancer; CT scan |
| Additional / Any Other Information: | N/A |
| Release Date: | April 29, 2026 |
| Access Licence Type: | Open Access |
Table 1. The sample types registered under this study are as follows:
Table 2. The samples registered under this study are as follows:
| Sample Type ID | Organism | Taxon ID | Biological Entity | Laterality | Source Tissue | Source Cell/Cell-line | Cell Organelle |
|---|---|---|---|---|---|---|---|
| CTSMT_10000000064 | Homo sapiens | 9606 | Multiple body regions | Both | N/A | N/A | N/A |
Table 2. The samples registered under this study are as follows:
| Sample Type ID | Sample ID | Subject Type | Clinical Indication (Diagnosis) | ICD-11 Code (patient health condition) | Tumor Site | Image category/label | De-identified Patient ID | Procedure | Clinical Information |
|---|---|---|---|---|---|---|---|---|---|
| CTSMT_10000000064 | CTSM_10000298159 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity- left upper alveolus | N/A | Patient_524 | CECT of Face-Neck-Chest | Ca left upper alveolus post surgery and post RT, for response evaluation. |
| CTSMT_10000000064 | CTSM_10000298163 | Head and neck cancer | Known case of cancer - Followup | 2C27 | Thymus | N/A | Patient_528 | CECT of Chest, Abdomen & Pelvis. | NS - GCT post chemo. |
| CTSMT_10000000064 | CTSM_10000298165 | Head and neck cancer | Known case of cancer - Followup | 2C23 | Larynx- glottis | N/A | Patient_530 | CECT of Face-Neck-Chest | h/o ca glottis post CTRT 2017 |
| CTSMT_10000000064 | CTSM_10000298166 | Head and neck cancer | Suspicious of malignancy | 2B69 | Oropharynx (Right tonsillar fossa) | N/A | Patient_531 | CECT of Face & Neck and chest. | CA left tonsil,post CTRT; To look for response. |
| CTSMT_10000000064 | CTSM_10000298169 | Head and neck cancer | Known case of cancer - Followup | 2C20 | Nasal cavity | N/A | Patient_534 | CECT of Face-Neck-Chest | K/C/O CA nasal cavity, post radical chemoradiotherapy and surgery |
| CTSMT_10000000064 | CTSM_10000298172 | Head and neck cancer | Suspicious of malignancy | 2B52 | Mandible | N/A | Patient_537 | CECT of Face-Neck-Chest | Ewing sarcoma, post treatment completion, on observation |
| CTSMT_10000000064 | CTSM_10000298174 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity (left buccal mucosa) with and recurrent disease | N/A | Patient_539 | CECT of Face-Neck-Chest-Abdomen and Pelvis | C/o Left buccal mucosa CA - Post op, On oral medical therapy |
| CTSMT_10000000064 | CTSM_10000298178 | Head and neck cancer | Known case of cancer - Followup | 2B62 | Oral cavity- left lateral tongue | N/A | Patient_543 | CECT of Face-Neck-Chest | cancer left lateral border of tongue on chemo |
| CTSMT_10000000064 | CTSM_10000298181 | Head and neck cancer | Known case of cancer - Followup | 2D03 | Lacrimal gland | N/A | Patient_546 | CECT of Head, neck and thorax | right lacrimal gland upper eye PD carcinoma post surgery (eventeration) to see residual. |
| CTSMT_10000000064 | CTSM_10000298183 | Head and neck cancer | Known case of cancer - Followup | 2B65 | Oropharynx (Soft palate) | N/A | Patient_548 | CECT of Face & Neck. | CA Uvula |
| CTSMT_10000000064 | CTSM_10000298184 | Head and neck cancer | Known case of cancer - Followup | 2B60 | Oral cavity (Lip) | N/A | Patient_549 | CECT of Face-Neck-Chest | F/u/c/o Ca lip |
| CTSMT_10000000064 | CTSM_10000298187 | Head and neck cancer | Known case of cancer - Followup | 2B6B | Nasopharynx | N/A | Patient_552 | CECT of Face-Neck-Chest | k/c/o metastatic nasopharyngeal carcinoma. |
| CTSMT_10000000064 | CTSM_10000298191 | Head and neck cancer | Known case of cancer - Followup | 2B66 | Oral cavity- alveolus | N/A | Patient_556 | CECT of Face-Neck-Chest | F/U/C recurrent CA alveolus, for response easement |
| CTSMT_10000000064 | CTSM_10000298194 | Head and neck cancer | Known case of cancer - Followup | 2C30 | Lymphnodes | N/A | Patient_559 | CECT of Neck, Chest, Abdomen & Pelvis. | C/o HL Stage IV |
| CTSMT_10000000064 | CTSM_10000298197 | Head and neck cancer | Known case of cancer - Followup | 2B62 | Oral cavity (right tongue) with and recurrent disease | N/A | Patient_562 | CECT of Face-Neck-Chest | K/c/o CA tongue - right |
| CTSMT_10000000064 | CTSM_10000298200 | Head and neck cancer | Known case of cancer - Followup | 2B65 | Oral cavity (hard palate) | N/A | Patient_565 | CECT of Face-Neck-Chest | C/o CA hard palate |
| CTSMT_10000000064 | CTSM_10000298203 | Head and neck cancer | Known case of cancer - Followup | 2B68 | Submandibular gland | N/A | Patient_568 | CECT of Chest, Abdomen & Pelvis. | Recurrent adenocarcinoma left submandibular and sublingual |
| CTSMT_10000000064 | CTSM_10000298208 | Head and neck cancer | Known case of cancer - Followup | 2C23 | Larynx - supraglottis and glottis with and recurrent disease | N/A | Patient_573 | CECT of Face-Neck-Chest | C/o CA larynx |
| CTSMT_10000000064 | CTSM_10000298212 | Head and neck cancer | Known case of cancer - Followup | 2B62 | Oral cavity- right lateral tongue | N/A | Patient_577 | CECT of Face-Neck-Chest | Ca right lateral border tongue - post - op status, Post CTRT. On follow up. |
| CTSMT_10000000064 | CTSM_10000298215 | Head and neck cancer | Known case of cancer - Followup | 2B62 | Oral cavity- right lateral tongue | N/A | Patient_580 | CECT of Face & Neck and chest. | Ca right lateral border of tongue, and Ca right buccal mucosa post radical radiotherapy in 2023 |
Table 3. The experiment types registered under this study are as follows:
| Experiment Type ID | Instrument Name | Instrument Type | Manufacturer | Model |
|---|---|---|---|---|
| CTET_10000000030 | CT-Scan Machine | Multisclice | Siemens Healthineers | Somatom Definition Edge |
| Experimental Design Summary (CTET_10000000030) |
|---|
| The CT scans included in this dataset were performed for patients diagnosed with head and neck cancer at our institute. The CT images include various body regions including face, neck, chest, abdomen and pelvis. These scans were performed at various stages of management of the cancer, including pre-treatment scans, post-radiotherapy response assessment scans, and post-operative follow-up scans. All the scans were double reported by two radiologists - first, a resident radiologist (3-6 years of experience), and second reading by a specialist onco-radiologist (more than 10 years of experience). |
| Acquired Images Annotation Description (CTET_10000000030) |
|---|
| Each CT scan in the dataset is accompanied by the summary of main findings in the corresponding radiology reports. All the scans were double reported by two radiologists - first, a resident radiologist (3-6 years of experience), and second reading by a specialist onco-radiologist (more than 10 years of experience). The findings from these reports provided in this dataset, are robust scan-level labels for each of the CT exams included in the dataset. Image and pixel-level annotations are not included in this dataset. |
Table 4. The experiments registered under this study are as follows:
| Sample ID | Experiment Type ID | Experiment ID | Image type (Original / Derived / Unknown) | Any Other Information | Image plane | Slice Progression Direction | Slice thickness (in mm) | Image Count | Contrast / Bolus ingredient | Image file format | Image modality type (contrast-enhanced or non-contrast) | Implants or devices visible in scan (yes/no) | Motion artifacts noted (yes/no) | Type of contrast agent | Use of contrast agent (yes/no) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CTSM_10000298043 | CTET_10000000030 | CTE_10000270570 | Derived | N/A | Axial | superio-inferior | 1 | 696 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298046 | CTET_10000000030 | CTE_10000270573 | Derived | N/A | Axial | superio-inferior | 1 | 833 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298049 | CTET_10000000030 | CTE_10000270576 | Derived | N/A | Axial | superio-inferior | 1 | 779 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298054 | CTET_10000000030 | CTE_10000270581 | Derived | N/A | Axial | superio-inferior | 1 | 890 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298059 | CTET_10000000030 | CTE_10000270586 | Derived | N/A | Axial | superio-inferior | 1 | 357 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298063 | CTET_10000000030 | CTE_10000270590 | Derived | N/A | Axial | superio-inferior | 1 | 775 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298065 | CTET_10000000030 | CTE_10000270592 | Derived | N/A | Axial | superio-inferior | 1 | 773 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298068 | CTET_10000000030 | CTE_10000270595 | Derived | N/A | Axial | superio-inferior | 1 | 769 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298070 | CTET_10000000030 | CTE_10000270597 | Derived | N/A | Axial | superio-inferior | 1 | 701 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298072 | CTET_10000000030 | CTE_10000270599 | Derived | N/A | Axial | superio-inferior | 1 | 377 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298081 | CTET_10000000030 | CTE_10000270608 | Derived | N/A | Axial | superio-inferior | 1 | 815 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298083 | CTET_10000000030 | CTE_10000270610 | Derived | N/A | Axial | superio-inferior | 1 | 693 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298085 | CTET_10000000030 | CTE_10000270612 | Derived | N/A | Axial | superio-inferior | 1 | 784 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298087 | CTET_10000000030 | CTE_10000270614 | Derived | N/A | Axial | superio-inferior | 1 | 741 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298090 | CTET_10000000030 | CTE_10000270617 | Derived | N/A | Axial | superio-inferior | 1 | 367 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298092 | CTET_10000000030 | CTE_10000270619 | Derived | N/A | Axial | superio-inferior | 1 | 819 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298094 | CTET_10000000030 | CTE_10000270621 | Derived | N/A | Axial | superio-inferior | 1 | 773 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298096 | CTET_10000000030 | CTE_10000270623 | Derived | N/A | Axial | superio-inferior | 1 | 819 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298099 | CTET_10000000030 | CTE_10000270626 | Derived | N/A | Axial | superio-inferior | 1 | 768 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| CTSM_10000298103 | CTET_10000000030 | CTE_10000270630 | Derived | N/A | Axial | superio-inferior | 1 | 802 | non ionic iodinated contrast | dcm | CECT | N/A | no | non ionic iodinated contrast | yes |
| Experiment ID | Image File Name (with path) | Image Preview | Image Size |
|---|---|---|---|
| CTE_10000270250 | HNC_data/Patient_88.zip |  Download Image |
150M |
| CTE_10000270251 | HNC_data/Patient_89.zip | Download Image |
239M |
| CTE_10000270252 | HNC_data/Patient_90.zip | Download Image |
227M |
| CTE_10000270253 | HNC_data/Patient_91.zip | Download Image |
104M |
| CTE_10000270254 | HNC_data/Patient_92.zip | Download Image |
205M |
| CTE_10000270255 | HNC_data/Patient_93.zip | Download Image |
201M |
| CTE_10000270256 | HNC_data/Patient_94.zip | Download Image |
241M |
| CTE_10000270257 | HNC_data/Patient_95.zip | Download Image |
223M |
| CTE_10000270258 | HNC_data/Patient_96.zip | Download Image |
173M |
| CTE_10000270259 | HNC_data/Patient_97.zip | Download Image |
214M |