9ZGF image
Deposition Date 2025-12-02
Release Date 2026-06-10
Last Version Date 2026-06-24
Entry Detail
PDB ID:
9ZGF
Keywords:
Title:
The complex of HSV-1 proteins UL9 and ICP8 with forked DNA
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Major DNA-binding protein
Gene (Uniprot):DBP
Chain IDs:A
Chain Length:1196
Number of Molecules:1
Biological Source:Human alphaherpesvirus 1 strain 17
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Replication origin-binding pr
Gene (Uniprot):UL9
Chain IDs:B (auth: C)
Chain Length:851
Number of Molecules:1
Biological Source:Human alphaherpesvirus 1 strain 17
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (40-MER)
Chain IDs:C (auth: D)
Chain Length:40
Number of Molecules:1
Biological Source:Human alphaherpesvirus 1 strain 17
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (31-MER)
Chain IDs:D (auth: E)
Chain Length:31
Number of Molecules:1
Biological Source:Human alphaherpesvirus 1 strain 17
Primary Citation
Structural insights into HSV-1 origin unwinding by the viral proteins UL9 and ICP8.
Nucleic Acids Res. 54 ? ? (2026)
PMID: 42283126 DOI: 10.1093/nar/gkag580

Abstact

Herpes simplex virus type 1 (HSV-1) causes lifelong infections in human cells and is associated with a range of diseases. HSV-1 DNA replication requires seven viral proteins, including the major DNA-binding protein ICP8, the origin-binding protein UL9, and proteins that comprise the helicase-primase and DNA polymerase complexes. UL9 functions as a DNA helicase that specifically recognizes and binds to the viral origins of replication, OriS and OriL. Here we report the cryo-EM structure of the UL9/ICP8/DNA/ATPgammaS complex at an overall resolution of 3.18 A. This structure revealed that UL9 employs an alpha-helix to separate the DNA strands and captures the initial step of OriS unwinding, in which the C-terminal domain of UL9 specifically binds to the major groove of a DNA double helix, while the N-terminal helicase domain engages the unwound leading and lagging strands. ICP8 interacts with the extreme C-terminal region of UL9, preventing UL9 dimerization. Simultaneously, it binds and stabilizes the leading-strand DNA adjacent to UL9. Together, these findings provide mechanistic insight into UL9-driven DNA unwinding and the cooperative action of UL9 and ICP8 at HSV-1 replication origins, establishing a structural framework for the rational interpretation of prior biochemical data and for the design of new antiviral drugs.

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Primary Citation of related structures
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