9ZD7 image
Deposition Date 2025-11-25
Release Date 2026-04-15
Last Version Date 2026-04-15
Entry Detail
PDB ID:
9ZD7
Keywords:
Title:
The cryo-EM structure of Pakpunavirus P7-1 short tail fiber (gp92) bound to the extended baseplate
Biological Source:
Source Organism(s):
Pakpunavirus (Taxon ID: 1921407)
Method Details:
Experimental Method:
Resolution:
4.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp88
Chain IDs:A (auth: 0), M (auth: L), N (auth: M), O (auth: N), V, W, X, EA (auth: f), FA (auth: g), GA (auth: h), NA (auth: o), TA (auth: u)
Chain Length:487
Number of Molecules:12
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp89
Chain IDs:B (auth: 1), P (auth: O), Y, HA (auth: i), OA (auth: p), UA (auth: v)
Chain Length:117
Number of Molecules:6
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp88
Chain IDs:CB (auth: 4), DB (auth: 2), EB (auth: 3), FB (auth: 5), GB (auth: 6), HB (auth: 7), IB (auth: 8), JB (auth: 9), KB (auth: AA)
Chain Length:788
Number of Molecules:9
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp83
Chain IDs:C (auth: A), D (auth: B), E (auth: C), F (auth: D), G (auth: E), H (auth: F)
Chain Length:253
Number of Molecules:6
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:short tail fiber gp92
Chain IDs:LB (auth: AE), MB (auth: AF), NB (auth: AG), OB (auth: AB), PB (auth: AC), QB (auth: AD), RB (auth: AH), SB (auth: AI), TB (auth: AJ), UB (auth: AK), VB (auth: AL), WB (auth: AM), XB (auth: AN), YB (auth: AO), ZB (auth: AP), AC (auth: AQ), BC (auth: AR), CC (auth: AS)
Chain Length:499
Number of Molecules:18
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp79
Chain IDs:I (auth: G), R (auth: Q), AA (auth: a), JA (auth: k), PA (auth: q), VA (auth: w)
Chain Length:159
Number of Molecules:6
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp78
Chain IDs:J (auth: H), S (auth: R), BA (auth: b), KA (auth: l), QA (auth: r), WA (auth: x)
Chain Length:166
Number of Molecules:6
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp84
Chain IDs:K (auth: I), T (auth: S), CA (auth: c), LA (auth: m), RA (auth: s), XA (auth: y)
Chain Length:487
Number of Molecules:6
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp85
Chain IDs:ZA (auth: J), AB (auth: T), BB (auth: d)
Chain Length:246
Number of Molecules:3
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:gp87
Chain IDs:L (auth: K), U, DA (auth: e), MA (auth: n), SA (auth: t), YA (auth: z)
Chain Length:487
Number of Molecules:6
Biological Source:Pakpunavirus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:tail tip gp86
Chain IDs:Q (auth: P), Z, IA (auth: j)
Chain Length:246
Number of Molecules:3
Biological Source:Pakpunavirus
Ligand Molecules
Primary Citation
The cryo-EM structure of Pakpunavirus P7-1 short tail filber (gp92) bound to the extended baseplate
To be published ? ? ? (?)
Primary Citation of related structures
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