9Z5M image
Deposition Date 2025-11-12
Release Date 2026-08-05
Last Version Date 2026-08-05
Entry Detail
PDB ID:
9Z5M
Keywords:
Title:
Crystal structure of TgCDPK1 with bound inhibitor
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Non-specific serine/threonine
Gene (Uniprot):CDPK1
Chain IDs:A
Chain Length:507
Number of Molecules:1
Biological Source:Toxoplasma gondii
Ligand Molecules
Primary Citation
Lead Optimization of TgCDPK1 Inhibitors for the Treatment of Toxoplasmosis.
J.Med.Chem. 69 14365 14389 (2026)
PMID: 42231809 DOI: 10.1021/acs.jmedchem.6c00065

Abstact

Toxoplasma gondii is an important opportunistic pathogen that infects many individuals and threatens the health of those with compromised immunity. Current therapies are unable to eradicate chronic infections and pose risks of adverse reactions. Using X-ray structure-based drug design, we have developed a new series of biaryl-substituted pyrazolopyrimidine inhibitors of the essential parasite enzyme calcium-dependent protein kinase 1 (TgCDPK1). These inhibitors have excellent potency against the enzyme and in vitro antiparasitic activity. We further optimized the compounds for increased metabolic stability, lowered plasma protein binding, decreased efflux, and improved pharmacokinetics (PK). Several of the inhibitors had desirable PK with high oral bioavailability, low clearance, and extended half-life, leading to excellent compound exposure in the plasma and brain over a 24-h period. Three compounds were tested during acute infection in both immunocompetent and immunocompromised mice. We identified 16c as a promising preclinical candidate to treat toxoplasmosis.

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Primary Citation of related structures
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