9Z4Y image
Deposition Date 2025-11-11
Release Date 2026-09-23
Last Version Date 2026-09-23
Entry Detail
PDB ID:
9Z4Y
Keywords:
DNA BINDING PROTEIN/DNA
Title:
Human APE1 D210N with Mg and substrate tetrahydrofuran-containing DNA
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Expression System(s):
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.05 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
9Z4Y validation report missing
Macromolecular Entities
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA repair nuclease/redox reg
Gene (Uniprot):APEX1
Mutagens:D210N
Chain IDs:A, D
Chain Length:279
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P27695 Pfam ID:PF03372 EC:4.2.99.18
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*CP*TP*AP*CP*(3D
Chain IDs:B, E
Chain Length:11
Number of Molecules:2
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*GP*AP*TP*CP*GP*
Chain IDs:C, F
Chain Length:11
Number of Molecules:2
Biological Source:synthetic construct
Ligand Molecules
MG
SO4
Primary Citation
Human APE1 D210N with Mg and substrate tetrahydrofuran-containing DNA
To Be Published ? ? ? (?)
Primary Citation of related structures
9Z4Y
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