ISDA: 9YDK

Deposition Date 2025-09-22

Release Date 2026-08-05

Last Version Date 2026-08-05

Entry Detail

PDB ID:

9YDK

Keywords:

RNA

Title:

Dickerson dodecamer RNA duplex containing a modified base with a 2-F-6-aminopurine/G mismatch.

Biological Source:

Source Organism(s):

synthetic construct (Taxon ID: 32630)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.12 Å

R-Value Free:

0.18

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

C 1 2 1

Download Validation Report

Macromolecular Entities

Polymer Type:polyribonucleotide
Molecule:RNA 12-mer
Chain IDs:A
Chain Length:12
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

A Postsynthetic Strategy for Oligonucleotides Containing 2-Fluoro-adenine and Isoguanine Nucleobases.

Madaoui, M, Kundu, J, Datta, D, Harp, J.M, Egli, M, Manoharan, M.Show

Org.Lett. 28 9133 9138 (2026)

PMID: 42455745 DOI: 10.1021/acs.orglett.6c01203

Primary Citation of related structures

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