ISDA: 9YBV

Deposition Date 2025-09-17

Release Date 2026-08-05

Last Version Date 2026-08-05

Entry Detail

PDB ID:

9YBV

Keywords:

DNA BINDING PROTEIN

Title:

ARID1B ARID bound to compound A-4 (N-[(5-methylthiophen-2-yl)methyl]-7,8-dihydro-5H-pyrano[4,3-b]pyridin-3-amine)

Biological Source:

Source Organism(s):

Homo sapiens (Taxon ID: 9606)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.20 Å

R-Value Free:

0.20

R-Value Work:

0.18

R-Value Observed:

0.19

Space Group:

P 65

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Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:AT-rich interactive domain-co
Gene (Uniprot):ARID1B
Chain IDs:A
Chain Length:120
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q8NFD5 Pfam ID:PF01388

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
MSE	A	MET	modified residue

Ligand Molecules

A1CT9

Primary Citation

Cryptic Small Molecule Binding Sites in the ARID1B DNA Binding Domain

Holliday, M.J, Carbone, C.E.Show

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Primary Citation of related structures

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