9Y0M image
Deposition Date 2025-08-28
Release Date 2026-03-25
Last Version Date 2026-04-29
Entry Detail
PDB ID:
9Y0M
Keywords:
Title:
Crystal structure of Escherichia coli DsbA P151T mutant
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.88 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Thiol:disulfide interchange p
Gene (Uniprot):dsbA
Mutagens:P151T
Chain IDs:A, B, C, D
Chain Length:190
Number of Molecules:4
Biological Source:Escherichia coli
Primary Citation
A universal cis-proline lock defines catalysis in thioredoxin-fold enzymes.
Commun Biol ? ? ? (2026)
PMID: 41981106 DOI: 10.1038/s42003-026-10010-8

Abstact

Thioredoxin-fold oxidoreductases drive oxidative protein folding and redox homeostasis across all domains of life. They catalyse thiol-disulfide exchange in diverse substrates, yet how they reconcile catalytic precision with substrate diversity remains unclear. Here we show, using high-resolution structures and functional analyses of the Escherichia coli oxidoreductase DsbA, that a conserved cis-proline loop adjacent to the catalytic Cys-Pro-His-Cys motif serves as a universal catalytic lock. The loop positions the substrate cysteine in a right-handed disulfide geometry optimal for exchange, while surrounding surfaces accommodate sequence variation. Substitution of the cis-proline abolishes turnover, whereas mutation of the preceding glycine preserves geometry but reduces efficiency. Comparative structural analyses demonstrate that this cis-proline-dependent hydrogen-bonding scaffold is conserved across thioredoxins, protein disulfide isomerases, peroxiredoxins and bacterial Dsb proteins. This conserved mechanism explains how catalytic fidelity is maintained while enabling substrate versatility and provides a foundation for enzyme engineering and therapeutic development.

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