9XIC image
Deposition Date 2025-11-02
Release Date 2026-10-14
Last Version Date 2026-10-14
Entry Detail
PDB ID:
9XIC
Keywords:
VIRAL PROTEIN/IMMUNE SYSTEM
Title:
SARS-CoV-2 Omicron JD.1.1 spike trimer (S-6P) in complex with 3 R102-9 Fabs and 3 C092 Fabs (3 RBD up)
Biological Source:
Source Organism(s):
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.76 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9XIC validation report missing
Macromolecular Entities
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A, F (auth: B), K (auth: C)
Chain Length:1243
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2
Polymer Type:polypeptide(L)
Molecule:Heavy chain of R102-9 Fab
Chain IDs:D, I (auth: E), N (auth: F)
Chain Length:221
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Heavy chain of C092 Fab
Chain IDs:B (auth: H), G, L (auth: I)
Chain Length:228
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Light chain of C092 Fab
Chain IDs:C (auth: L), H (auth: J), M (auth: K)
Chain Length:217
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Light chain of R102-9 Fab
Chain IDs:E (auth: M), J (auth: N), O
Chain Length:215
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
Artificial intelligence-driven discovery of ultrapotent and broadly neutralizing antibodies against SARS-CoV-2 from a long-lived public antibody lineage
To be published ? ? ? (?)
Primary Citation of related structures
9XIC
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