9WSP image
Deposition Date 2025-09-15
Release Date 2026-04-29
Last Version Date 2026-04-29
Entry Detail
PDB ID:
9WSP
Keywords:
Title:
Cryo-EM structure of SARS CoV2 S protein with stabilising mutations
Biological Source:
Expression System(s):
Method Details:
Experimental Method:
Resolution:
4.55 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A (auth: B)
Chain Length:1121
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
Ligand Molecules
Primary Citation
Development of a Thermostable and Broadly Neutralizing Pan-Sarbecovirus Vaccine Candidate.
Acs Infect Dis. 12 104 118 (2026)
PMID: 41436061 DOI: 10.1021/acsinfecdis.5c00479

Abstact

Zoonotic spillover of sarbecoviruses to humans resulted in the SARS-CoV-1 outbreak in 2003 and the current COVID-19 pandemic caused by SARS-CoV-2. In both cases, the viral spike protein (S) is the principal target of neutralizing antibodies that prevent infection. Within the spike, the immunodominant receptor-binding domain (RBD) is the primary target of neutralizing antibodies in COVID-19 convalescent sera and vaccine recipients. We have constructed stabilized RBD derivatives of different sarbecoviruses: SARS-CoV-1 (Clade 1a), WIV-1 (Clade 1a), RaTG13 (Clade 1b), RmYN02 (Clade 2), and BtKY72 (Clade 3). Stabilization enhanced yield by 3-23-fold. The RBD derivatives were conformationally intact, as assayed by binding to multiple broadly neutralizing antibodies. The stabilized RBDs show significant enhancement in apparent T(m), exhibit resistance to a 2-h incubation at temperatures up to 60 degrees C in PBS in contrast to the corresponding WT RBDs, and show prolonged stability of over 15 days at 37 degrees C after lyophilization. In mice immunizations, both stabilization and trimerization significantly enhanced elicited neutralization titers by approximately 100-fold. The stabilized RBD cocktail elicited highly neutralizing titers against both homologous and heterologous pseudoviruses. The immunogenicity of the vaccine formulation was assessed in both naive and SARS-CoV-2 preimmunized mice, revealing an absence of immune imprinting, thus indicating its suitability for use in future sarbecovirus-origin epidemics or pandemics.

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Disease

Primary Citation of related structures
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