9WMQ image
Deposition Date 2025-09-03
Release Date 2026-07-01
Last Version Date 2026-07-01
Entry Detail
PDB ID:
9WMQ
Title:
The cryo-electron microscopy complex structure of PCV3 VLPs and antibody 2B5
Biological Source:
Source Organism(s):
Porcine circovirus 3 (Taxon ID: 1868221)
Mus (Taxon ID: 10088)
Method Details:
Experimental Method:
Resolution:
1.73 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cap
Gene (Uniprot):ORF2
Chain IDs:A (auth: F)
Chain Length:182
Number of Molecules:1
Biological Source:Porcine circovirus 3
Protein Blast
Polymer Type:polypeptide(L)
Molecule:heavy chain of antibody 2B5
Chain IDs:B (auth: H)
Chain Length:120
Number of Molecules:1
Biological Source:Mus
Protein Blast
Polymer Type:polypeptide(L)
Molecule:light chain of antibody 2B5
Chain IDs:C (auth: L)
Chain Length:104
Number of Molecules:1
Biological Source:Mus
Ligand Molecules
Primary Citation
Structural basis and immunogenic efficacy of porcine circovirus type 3 virus-like particle.
Nat Commun ? ? ? (2026)
PMID: 42303972 DOI: 10.1038/s41467-026-74388-z

Abstact

Porcine circovirus type 3 (PCV3) is an emerging swine pathogen associated with reproductive failure and systemic inflammation, but vaccines for related PCV2 provide limited cross-protection. Here, we determine high-resolution cryo-EM structures of PCV3 capsid protein assembled into virus-like particles (VLPs) and of PCV3 VLPs bound to the PCV3-specific antibody 2B5. The structures reveal differences from PCV2 in surface loops and define a conserved 2B5 epitope mainly involving the BC, EF and HI loops, providing a structural basis for PCV3-specific recognition. PCV3 VLPs induce sustained antibody responses in mice and pigs. In a pig challenge model, VLP immunization prevents viremia and viral replication in lungs and lymph nodes, as measured by quantitative PCR and in situ hybridization, with protection maintained for at least five months after boosting. These findings support PCV3 VLPs as a vaccine candidate against PCV3 infection.

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Disease

Primary Citation of related structures
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