9WJD image
Deposition Date 2025-08-30
Release Date 2026-07-08
Last Version Date 2026-07-08
Entry Detail
PDB ID:
9WJD
Keywords:
IMMUNE SYSTEM
Title:
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with C14-Gly1-Gly2-Ile3-Ile4 lipopeptide
Biological Source:
Source Organism(s):
Macaca mulatta (Taxon ID: 9544)
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Expression System(s):
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.70 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
9WJD validation report missing
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:B protein
Gene (Uniprot):Mamu-B
Chain IDs:A
Chain Length:276
Number of Molecules:1
Biological Source:Macaca mulatta
UniProt ID:B2ZHY7
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P61769 Pfam ID:PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:4-mer Lipopeptide
Chain IDs:C
Chain Length:4
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
EDO
MYR
NA
ZN
Primary Citation
Lipopeptide ligands captured by MHC class I molecules undergo dynamic conformational changes that affect their antigenic strength.
J.Biol.Chem. 302 111049 111049 (2026)
PMID: 41391759 DOI: 10.1016/j.jbc.2025.111049
Primary Citation of related structures
9WJD
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