9W5Z image
Deposition Date 2025-08-02
Release Date 2026-06-10
Last Version Date 2026-06-10
Entry Detail
PDB ID:
9W5Z
Keywords:
Title:
Structure of heme transport protein Shr-Linker-NEAT1 from Streptococcus pyogenes in complex with heme.
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Streptococcal hemoprotein rec
Gene (Uniprot):SPy_1798
Chain IDs:A, B
Chain Length:209
Number of Molecules:2
Biological Source:Streptococcus pyogenes
Primary Citation
Structural basis for heme binding by the Shr protein from Streptococcus pyogenes.
J.Biol.Chem. 302 111012 111012 (2026)
PMID: 41354341 DOI: 10.1016/j.jbc.2025.111012

Abstact

Streptococcus pyogenes causes a range of infectious diseases. In an era of increasing antibiotic resistance, new antimicrobial strategies targeting virulence factors, rather than essential survival mechanisms, are being explored. A key virulence factor in S. pyogenes is the bacterial iron acquisition system, because iron is essential but limited in the host due to sequestration by proteins like hemoglobin. The bacteria S. pyogenes possesses the Shr protein that acquires heme from host hemoglobin and transfers it to Shp, a membrane proximity protein. Shr comprises multiple domains, including two NEAr-Transporter (NEAT) domains that directly bind to heme. While structural information of NEAT domains from other bacteria are available, the structure of NEAT domains from Shr remains unknown. In this study, crystal structures of Linker-NEAT1 and NEAT2 domains were determined to 2.35 A resolution and 2.66 A resolution, respectively. Structural and mutational analyses revealed that methionine residues play a key role in heme binding, which seems to be a characteristic of heme-binding proteins from S. pyogenes, but not of NEAT domains from other gram-positive species. These findings enhance our understanding of heme acquisition in S. pyogenes and may guide novel therapeutic approaches.

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Primary Citation of related structures
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