9VNC image
Deposition Date 2025-06-30
Release Date 2026-07-01
Last Version Date 2026-08-12
Entry Detail
PDB ID:
9VNC
Title:
Cryo-EM structure of TRP melastatin channel in the desensitized state, with icilin
Biological Source:
Source Organism(s):
Mus musculus (Taxon ID: 10090)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.45 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Transient receptor potential
Chain IDs:A, B (auth: D), C, D (auth: B)
Chain Length:1118
Number of Molecules:4
Biological Source:Mus musculus
Primary Citation
Symmetry-driven gating of TRPM8 by PIP 2 and menthol.
Nat Commun 17 ? ? (2026)
PMID: 42481499 DOI: 10.1038/s41467-026-75793-0

Abstact

TRPM8, a cold-activated ion channel, enables mammals to sense cooling agents such as menthol. While PIP(2) is essential for menthol-induced activation of TRPM8, the precise cooperative mechanism and the specific binding mode of menthol have remained elusive. Here, we present cryo-EM structures of mouse TRPM8 in diverse conformations, including a PIP(2)-induced two-fold symmetric intermediate and an icilin-bound open state. Our results reveal that PIP(2) binding initiates a symmetry-breaking event, priming the channel for activation through a noncanonical intermediate states. The subsequent binding of cooling agonists promotes a transition back to four-fold symmetry. Notably, we find that menthol stabilizes the PIP(2)-bound state, thereby overcoming channel desensitization, while icilin, in concert with calcium, stabilizes a fully open conformation. Together, these structures illuminate a stepwise activation pathway involving distinct symmetry transitions and define the cooperative allosteric mechanism by which PIP(2) and cooling agonists gate the channel.

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