ISDA: 9VDB

Deposition Date 2025-06-07

Release Date 2026-06-17

Last Version Date 2026-07-22

Entry Detail

PDB ID:

9VDB

Keywords:

OXIDOREDUCTASE

Title:

Crystal Structure of Dioxin Dioxygenase from Rhizorhabdus wittichii RW1

Biological Source:

Source Organism(s):

Rhizorhabdus wittichii RW1 (Taxon ID: 392499)

Expression System(s):

Escherichia coli bl21(de3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.70 Å

R-Value Free:

0.29

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

P 2 3

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:Ring hydroxylating dioxygenas
Chain IDs:A
Chain Length:435
Number of Molecules:1
Biological Source:Rhizorhabdus wittichii RW1

Polymer Type:polypeptide(L)
Molecule:Aromatic-ring-hydroxylating d
Chain IDs:B
Chain Length:179
Number of Molecules:1
Biological Source:Rhizorhabdus wittichii RW1

Ligand Molecules

DTT

EDO

FE2

FES

PEG

Primary Citation

Structural and mechanistic insights into dioxin dioxygenase (DxnA1A2) from Rhizorhabdus wittichii RW1: A key enzyme for biodegradation of hazardous dioxins and furans.

Kayastha, A, Verma, S, Das, A, Dhaka, P, Rana, A, Ambatipudi, K, Kumar, P.Show

Int.J.Biol.Macromol. 373 153246 153246 (2026)

PMID: 42364751 DOI: 10.1016/j.ijbiomac.2026.153246

Primary Citation of related structures

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