9U93 image
Deposition Date 2025-03-27
Release Date 2025-09-03
Last Version Date 2026-03-18
Entry Detail
PDB ID:
9U93
Keywords:
Title:
Cryo-EM structure of Fusobacterium nucleatum CbpF in complex with human CEACAM5
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fusobacterium nucleatum CbpF
Chain IDs:A (auth: C), C (auth: B), E (auth: A)
Chain Length:342
Number of Molecules:3
Biological Source:Fusobacterium nucleatum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cell adhesion molecule CEACAM
Gene (Uniprot):CEACAM5
Chain IDs:B (auth: F), D, F (auth: E)
Chain Length:148
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Binding of Fusobacterium nucleatum autotransporter adhesin CbpF to human CEACAM1 and CEACAM5: A Velcro model for bacterium adhesion.
Proc. Natl. Acad. Sci. U.S.A. 122 e2516574122 e2516574122 (2025)
PMID: 40928870 DOI: 10.1073/pnas.2516574122

Abstact

In eukaryotic systems, three major types of cell junctions have been well characterized. While bacterial adhesion mechanisms also exhibit remarkable diversity, the molecular processes that regulate the dynamic modulation of binding strength between elongated bacterial cells and host cells remain poorly understood. Fusobacterium nucleatum (F. nucleatum) utilizes the surface adhesin CbpF to interact with the highly expressed host receptors CEACAM1 and CEACAM5 on cancer cells to facilitate tumor colonization. By elucidating the structural details of CbpF binding to human CEACAM1/CEACAM5 receptors, and through mechanistic investigations, we identified that the prominent EFNGQYQ loop on CbpF and the key Q78 residue of CEACAM1/CEACAM5 constitute the molecular linchpin of this pathogen-host interface. Furthermore, we found a distinct type of binding particle and proposed a Velcro-like adhesion model. In this model, CbpF mediates robust attachment through the simultaneous interaction of multiple binding sites, akin to the interlocking mechanism of Velcro. This multivalent interaction allows F. nucleatum to dynamically switch between firm anchoring and easy detachment, adapting to varying physiological microenvironments. Our study elucidates the dynamic modulation of bacterial adhesion strength and lays the foundation for developing therapeutic interventions to disrupt the bacterium-host interface.

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Primary Citation of related structures
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