ISDA: 9TZE

Deposition Date 2026-01-22

Release Date 2026-04-22

Last Version Date 2026-04-29

Entry Detail

PDB ID:

9TZE

Keywords:

RIBOSOME

Title:

70S Coxiella burnetii Ribosome with Doxycycline and HPFcold

Biological Source:

Source Organism(s):

Coxiella burnetii (Taxon ID: 777)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.48 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmG
Chain IDs:V (auth: 0)
Chain Length:70
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83EM5 Pfam ID:PF00471

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplX
Chain IDs:W (auth: 1)
Chain Length:107
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ER5 Pfam ID:PF00467, PF17136

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplR
Chain IDs:X (auth: 2)
Chain Length:117
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ER0 Pfam ID:PF00861

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmJ
Chain IDs:Y (auth: 3)
Chain Length:40
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q4AAY2 Pfam ID:PF00444

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmE
Chain IDs:VA (auth: 4)
Chain Length:79
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83D39 Pfam ID:PF01197

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmB
Chain IDs:ZA (auth: 6)
Chain Length:79
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J5S6

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplW
Chain IDs:YA (auth: 7)
Chain Length:95
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ES2 Pfam ID:PF00276

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmA
Chain IDs:XA (auth: 8)
Chain Length:90
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J9K3

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosome hibernation promotin
Gene (Uniprot):CBU_0020
Chain IDs:WA (auth: 9)
Chain Length:183
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83FC0 Pfam ID:PF02482, PF00313

Polymer Type:polyribonucleotide
Molecule:16S ribosomal RNA
Chain IDs:A
Chain Length:1535
Number of Molecules:1
Biological Source:Coxiella burnetii

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsC
Chain IDs:B (auth: C)
Chain Length:227
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:O85388 Pfam ID:PF07650, PF00189

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsD
Chain IDs:C (auth: D)
Chain Length:206
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83EQ3 Pfam ID:PF00163, PF01479

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsE
Chain IDs:D (auth: E)
Chain Length:168
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83EQ9 Pfam ID:PF00333, PF03719

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsF
Chain IDs:E (auth: F)
Chain Length:127
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83D76 Pfam ID:PF01250

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsG
Chain IDs:F (auth: G)
Chain Length:191
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ES8 Pfam ID:PF00177

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsH
Chain IDs:G (auth: H)
Chain Length:130
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ER2 Pfam ID:PF00410

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsI
Chain IDs:H (auth: I)
Chain Length:139
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83AX9 Pfam ID:PF00380

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsJ
Chain IDs:I (auth: J)
Chain Length:110
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ES5 Pfam ID:PF00338

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsK
Chain IDs:J (auth: K)
Chain Length:123
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83EQ4 Pfam ID:PF00411

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsL
Chain IDs:K (auth: L)
Chain Length:124
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ES9 Pfam ID:PF00164

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsM
Chain IDs:L (auth: M)
Chain Length:119
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:P59753 Pfam ID:PF00416

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsN
Chain IDs:M (auth: N)
Chain Length:99
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ER3 Pfam ID:PF00253

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsO
Chain IDs:N (auth: O)
Chain Length:89
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83D88 Pfam ID:PF00312

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsP
Chain IDs:O (auth: P)
Chain Length:137
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83E83 Pfam ID:PF00886

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsQ
Chain IDs:P (auth: Q)
Chain Length:89
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ER7 Pfam ID:PF00366

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsR
Chain IDs:Q (auth: R)
Chain Length:73
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83D75 Pfam ID:PF01084

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsS
Chain IDs:R (auth: S)
Chain Length:95
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ES0 Pfam ID:PF00203

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsT
Chain IDs:S (auth: T)
Chain Length:90
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ED6 Pfam ID:PF01649

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Gene (Uniprot):rpsU
Chain IDs:T (auth: U)
Chain Length:74
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83BB9 Pfam ID:PF01165

Polymer Type:polypeptide(L)
Molecule:Coxiellacae Large Subunit Pep
Chain IDs:U (auth: Z)
Chain Length:21
Number of Molecules:1
Biological Source:Coxiella burnetii

Polymer Type:polyribonucleotide
Molecule:23S ribosomal RNA
Chain IDs:AB (auth: a)
Chain Length:2925
Number of Molecules:1
Biological Source:Coxiella burnetii

Polymer Type:polyribonucleotide
Molecule:5S ribosomal RNA
Chain IDs:Z (auth: b)
Chain Length:117
Number of Molecules:1
Biological Source:Coxiella burnetii

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplS
Chain IDs:AA (auth: c)
Chain Length:115
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83E85 Pfam ID:PF01245

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplC
Chain IDs:BA (auth: d)
Chain Length:217
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J263

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplT
Chain IDs:CA (auth: e)
Chain Length:119
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83C13 Pfam ID:PF00453

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplE
Chain IDs:DA (auth: f)
Chain Length:182
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83ER4 Pfam ID:PF00281, PF00673

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplF
Chain IDs:EA (auth: g)
Chain Length:178
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J5E7

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplU
Chain IDs:FA (auth: h)
Chain Length:115
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:Q83EE0 Pfam ID:PF00829

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplM
Chain IDs:GA (auth: i)
Chain Length:142
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J4G5

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplV
Chain IDs:HA (auth: j)
Chain Length:115
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J258

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplO
Chain IDs:IA (auth: k)
Chain Length:143
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J244

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplQ
Chain IDs:JA (auth: m)
Chain Length:126
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J237

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplB
Chain IDs:KA (auth: o)
Chain Length:275
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J260

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplI
Chain IDs:LA (auth: q)
Chain Length:152
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:A9ND50

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmC
Chain IDs:MA (auth: r)
Chain Length:65
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J5E0

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplP
Chain IDs:NA (auth: s)
Chain Length:137
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J256

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmD
Chain IDs:OA (auth: t)
Chain Length:63
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J5F0

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplY
Chain IDs:PA (auth: u)
Chain Length:244
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J9D8

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmF
Chain IDs:QA (auth: v)
Chain Length:64
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J8E7

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplD
Chain IDs:RA (auth: w)
Chain Length:205
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:A9NAM5

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplN
Chain IDs:SA (auth: x)
Chain Length:122
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J5E2

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmH
Chain IDs:TA (auth: y)
Chain Length:44
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J2B1

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmI
Chain IDs:UA (auth: z)
Chain Length:64
Number of Molecules:1
Biological Source:Coxiella burnetii

UniProt ID:B6J7Y0

Modified Residue