ISDA: 9TVT

Deposition Date 2026-01-13

Release Date 2026-07-15

Last Version Date 2026-07-15

Entry Detail

PDB ID:

9TVT

Keywords:

VIRAL PROTEIN

Title:

CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD-beta variant) in complex with 3D2 Fab and 1D1 Fab

Biological Source:

Source Organism(s):

Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Homo sapiens (Taxon ID: 9606)

Expression System(s):

Trichoplusia ni, Homo sapiens

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.85 Å

R-Value Free:

0.26

R-Value Work:

0.20

Space Group:

C 1 2 1

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike protein S1
Gene (Uniprot):S
Mutagens:K417N, E484K, N501Y
Chain IDs:A, B
Chain Length:231
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF09408

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:1D1 FAB HEAVY CHAIN
Chain IDs:C, G (auth: H)
Chain Length:221
Number of Molecules:2
Biological Source:Homo sapiens

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:1D1 FAB LIGHT CHAIN
Chain IDs:D, J (auth: L)
Chain Length:214
Number of Molecules:2
Biological Source:Homo sapiens

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:3D2 FAB HEAVY CHAIN
Chain IDs:E, H (auth: I)
Chain Length:231
Number of Molecules:2
Biological Source:Homo sapiens

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:3D2 FAB LIGHT CHAIN
Chain IDs:F, I (auth: J)
Chain Length:216
Number of Molecules:2
Biological Source:Homo sapiens

Ligand Molecules