ISDA: 9T68

Deposition Date 2025-11-06

Release Date 2026-08-12

Last Version Date 2026-08-12

Entry Detail

PDB ID:

9T68

Keywords:

UNKNOWN FUNCTION

Title:

Composite structure of the repeat unit of cytoplasmic lattice filament

Biological Source:

Source Organism(s):

Mus musculus (Taxon ID: 10090)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

8.00 Å

Aggregation State:

FILAMENT

Reconstruction Method:

SUBTOMOGRAM AVERAGING

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:KH domain-containing protein
Chain IDs:A (auth: 0), AB (auth: An), EC (auth: S), VC (auth: j)
Chain Length:682
Number of Molecules:4
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Inactive protein-arginine dei
Chain IDs:B (auth: 1), C (auth: 2), D (auth: 3), K (auth: A), O (auth: AB), P (auth: AC), Q (auth: AD), NA (auth: Aa), OA (auth: Ab), PA (auth: Ac), QA (auth: Ad), MB (auth: Az), NB (auth: B), OB (auth: C), PB (auth: D), QB (auth: E), RB (auth: F), SB (auth: G), TB (auth: H), UB (auth: I), VB (auth: J), WB (auth: K), XB (auth: L), XC (auth: l), YC (auth: m), FD (auth: t), GD (auth: u), HD (auth: v), ID (auth: w), JD (auth: x), KD (auth: y), LD (auth: z)
Chain Length:163
Number of Molecules:32
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:NACHT, LRR and PYD domains-co
Chain IDs:E (auth: 4), H (auth: 7), S (auth: AF), EA (auth: AR), SA (auth: Af), XA (auth: Ak), YB (auth: M), BC (auth: P)
Chain Length:1163
Number of Molecules:8
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Transducin-like enhancer prot
Chain IDs:F (auth: 5), I (auth: 8), FA (auth: AS), UA (auth: Ah), YA (auth: Al), ZB (auth: N), CC (auth: Q), JC (auth: X)
Chain Length:581
Number of Molecules:8
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Oocyte-expressed protein homo
Chain IDs:G (auth: 6), J (auth: 9), DA (auth: AQ), WA (auth: Aj), ZA (auth: Am), AC (auth: O), DC (auth: R), UC (auth: i)
Chain Length:445
Number of Molecules:8
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:F-box/WD repeat-containing pr
Chain IDs:L (auth: A1), Y (auth: AL), AA (auth: AN), KA (auth: AX), GB (auth: At), IB (auth: Av), KB (auth: Ax), QC (auth: e), SC (auth: g), ED (auth: s)
Chain Length:466
Number of Molecules:10
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:S-phase kinase-associated pro
Chain IDs:M (auth: A2), Z (auth: AM), BA (auth: AO), LA (auth: AY), MA (auth: AZ), HB (auth: Au), JB (auth: Aw), LB (auth: Ay), RC (auth: f), TC (auth: h)
Chain Length:163
Number of Molecules:10
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Zinc finger BED domain-contai
Chain IDs:N (auth: AA), R (auth: AE), CA (auth: AP), GA (auth: AT), RA (auth: Ae), TA (auth: Ag), BB (auth: Ao), CB (auth: Ap), FC (auth: T), WC (auth: k)
Chain Length:993
Number of Molecules:10
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:NACHT, LRR and PYD domains-co
Chain IDs:T (auth: AG), LC (auth: Z), ZC (auth: n)
Chain Length:993
Number of Molecules:3
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase U
Chain IDs:U (auth: AH), MC (auth: a), AD (auth: o)
Chain Length:782
Number of Molecules:3
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Ubiquitin-conjugating enzyme
Chain IDs:V (auth: AI), NC (auth: b), BD (auth: p)
Chain Length:147
Number of Molecules:3
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Tubulin alpha-1C chain
Chain IDs:W (auth: AJ), IA (auth: AV), EB (auth: Ar), OC (auth: c), CD (auth: q)
Chain Length:449
Number of Molecules:5
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Tubulin beta-4B chain
Chain IDs:X (auth: AK), JA (auth: AW), FB (auth: As), PC (auth: d), DD (auth: r)
Chain Length:445
Number of Molecules:5
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:NLR family, pyrin domain cont
Chain IDs:HA (auth: AU), VA (auth: Ai), DB (auth: Aq), KC (auth: Y)
Chain Length:937
Number of Molecules:4
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Polyubiquitin-C
Chain IDs:GC (auth: U), HC (auth: V), IC (auth: W)
Chain Length:76
Number of Molecules:3
Biological Source:Mus musculus

Ligand Molecules

Primary Citation

In situ cryo-ET of mammalian embryos reveals cytoplasmic lattices contain ubiquitin-charged E2-E3 ligase assemblies

Singh, K, Harasimov, K, Niakan, K.K, Carter, A.Show

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