9T0H image
Deposition Date 2025-10-17
Release Date 2026-03-11
Last Version Date 2026-03-18
Entry Detail
PDB ID:
9T0H
Title:
NCS-1 bound to a FDA-approved drug
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.91 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Neuronal calcium sensor 1
Gene (Uniprot):NCS1
Chain IDs:A (auth: B)
Chain Length:170
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
An AI-based approach accelerates the discovery of protein-protein interaction modulators targeting NCS-1.
Eur J Med Chem 309 118739 118739 (2026)
PMID: 41785832 DOI: 10.1016/j.ejmech.2026.118739

Abstact

Drug repurposing is an efficient strategy to accelerate the identification of therapeutic compounds by finding new uses for existing drugs. Here, we leveraged artificial intelligence (AI) to optimize this process and discover protein-protein interaction (PPI) modulators targeting the Neuronal Calcium Sensor 1. AI models were trained on large datasets of known PPIs, protein structures, and small molecular graphs to predict binding score. Using virtual screening of an FDA-approved drug library, the models generated a prioritized list of candidates. The most promising compounds were selected for experimental validation. This integrated approach efficiently reduced experimental workload, time, and cost, leading to the identification of dipyridamole as a selective modulator of the interaction between NCS-1 and the dopamine D(2) receptor. The crystal structure of NCS-1 in complex with dipyridamole elucidates its mechanism of modulation. Our findings highlight the potential of AI to streamline and accelerate the discovery of novel therapeutic PPI modulators.

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Primary Citation of related structures
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