ISDA: 9SR5

Deposition Date 2025-09-24

Release Date 2026-10-07

Last Version Date 2026-10-07

Entry Detail

PDB ID:

9SR5

Keywords:

HYDROLASE

Title:

Crystal Structure of the NlpC/P60 Peptidase YkfC from Bacillus subtilis

Biological Source:

Source Organism(s):

Bacillus subtilis subsp. subtilis str. 168 (Taxon ID: 224308)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.33 Å

R-Value Free:

0.26

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

P 32 2 1

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Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Gamma-D-glutamyl-L-lysine dip
Gene (Uniprot):ykfC
Chain IDs:A
Chain Length:311
Number of Molecules:1
Biological Source:Bacillus subtilis subsp. subtilis str. 168

UniProt ID:O35010 Pfam ID:PF23795, PF00877 EC:3.4.14.13

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
OCS	A	CYS	modified residue

Ligand Molecules

GOL

NHE

SO4

Primary Citation

Crystal Structure of the NlpC/P60 Peptidase YkfC from Bacillus subtilis

Voelpel, S.V, Mayer, C, Stehle, T.Show

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