ISDA: 9RVW

Deposition Date 2025-07-09

Release Date 2026-07-22

Last Version Date 2026-08-19

Entry Detail

PDB ID:

9RVW

Keywords:

TRANSFERASE

Title:

Crystal structure of nucleoside diphosphate kinase (NDK) from Streptococcus pneumoniae

Biological Source:

Source Organism(s):

Streptococcus pneumoniae R6 (Taxon ID: 171101)

Expression System(s):

Escherichia coli bl21(de3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.20 Å

R-Value Free:

0.18

R-Value Work:

0.17

Space Group:

H 3 2

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Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nucleoside diphosphate kinase
Gene (Uniprot):ndk
Chain IDs:A
Chain Length:0
Number of Molecules:1
Biological Source:Streptococcus pneumoniae R6

UniProt ID:P65537 Pfam ID:PF00334 EC:2.7.4.6

Primary Citation

Quaternary structures of Streptococcus pneumoniae nucleoside diphosphate kinase: From hexamers to supramolecular assemblies.

Kerboeuf, J, Nouri, P, Galisson, F, Daury, L, Giraud, M.F, Lambert, O, Orelle, C, Ballut, L, Kaplan, E, Jault, J.M, Gonzalez, C.Show

Protein Sci. 35 e70735 e70735 (2026)

PMID: 42568346 DOI: 10.1002/pro.70735

Primary Citation of related structures

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