9RVU image
Deposition Date 2025-07-09
Release Date 2026-04-01
Last Version Date 2026-04-01
Entry Detail
PDB ID:
9RVU
Keywords:
RIBOSOME
Title:
in situ S. pombe hibernating ribosome after 7 days of glucose depletion
Biological Source:
Source Organism(s):
Schizosaccharomyces pombe (Taxon ID: 4896)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.38 Å
Aggregation State:
CELL
Reconstruction Method:
SUBTOMOGRAM AVERAGING
9RVU validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:EC (auth: A)
Chain Length:20
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polyribonucleotide
Molecule:18S small subunit ribosomal R
Chain IDs:A (auth: AA)
Chain Length:118
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:B (auth: AD)
Chain Length:143
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:C (auth: AE)
Chain Length:252
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:D (auth: AF)
Chain Length:89
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:E (auth: AG)
Chain Length:119
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:F (auth: AH)
Chain Length:83
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:G (auth: AI)
Chain Length:68
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:H (auth: AJ)
Chain Length:239
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:I (auth: AK)
Chain Length:61
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:J (auth: AL)
Chain Length:200
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:K (auth: AM)
Chain Length:314
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:L (auth: AN)
Chain Length:147
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:M (auth: AO)
Chain Length:152
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:N (auth: AP)
Chain Length:145
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:O (auth: AQ)
Chain Length:151
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:P (auth: AR)
Chain Length:139
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:Q (auth: AS)
Chain Length:154
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:R (auth: AT)
Chain Length:140
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:S (auth: AU)
Chain Length:131
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:T (auth: AV)
Chain Length:152
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:U (auth: AW)
Chain Length:144
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:V (auth: Aa)
Chain Length:118
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:W (auth: Ab)
Chain Length:87
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:X (auth: Ac)
Chain Length:130
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:Y (auth: Ad)
Chain Length:143
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:Z (auth: Ae)
Chain Length:252
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:AA (auth: Af)
Chain Length:89
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:BA (auth: Ag)
Chain Length:119
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:CA (auth: Ah)
Chain Length:83
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:DA (auth: Ai)
Chain Length:68
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:EA (auth: Aj)
Chain Length:239
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:FA (auth: Ak)
Chain Length:61
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit prote
Chain IDs:GA (auth: Am)
Chain Length:314
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:HA (auth: B0)
Chain Length:106
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:IA (auth: B1)
Chain Length:94
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polyribonucleotide
Molecule:28S large subunit ribosomal R
Chain IDs:JA (auth: B2)
Chain Length:3498
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polyribonucleotide
Molecule:5S large subunit ribosomal RN
Chain IDs:KA (auth: B3)
Chain Length:246
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polyribonucleotide
Molecule:5.8S large subunit ribosomal
Chain IDs:LA (auth: B4)
Chain Length:165
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:BC (auth: BA)
Chain Length:197
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:MA (auth: BN)
Chain Length:61
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:NA (auth: BO)
Chain Length:109
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:OA (auth: BP)
Chain Length:113
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:PA (auth: BQ)
Chain Length:127
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:QA (auth: BR)
Chain Length:195
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:RA (auth: BS)
Chain Length:251
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:SA (auth: BT)
Chain Length:259
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:CC (auth: BU)
Chain Length:189
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:TA (auth: BV)
Chain Length:221
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:UA (auth: BW)
Chain Length:174
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:VA (auth: BX)
Chain Length:51
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:WA (auth: BY)
Chain Length:134
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:XA (auth: BZ)
Chain Length:201
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:YA (auth: Ba)
Chain Length:197
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:DC (auth: Bb)
Chain Length:187
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:ZA (auth: Bc)
Chain Length:187
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:AB (auth: Bd)
Chain Length:193
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:BB (auth: Be)
Chain Length:176
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:CB (auth: Bf)
Chain Length:160
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:DB (auth: Bg)
Chain Length:117
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:EB (auth: Bh)
Chain Length:139
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:FB (auth: Bi)
Chain Length:149
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:GB (auth: Bj)
Chain Length:141
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:HB (auth: Bk)
Chain Length:126
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:IB (auth: Bl)
Chain Length:136
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:JB (auth: Bm)
Chain Length:148
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:KB (auth: Bn)
Chain Length:61
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:LB (auth: Bo)
Chain Length:109
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:MB (auth: Bp)
Chain Length:113
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:NB (auth: Bq)
Chain Length:127
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:OB (auth: Br)
Chain Length:195
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:PB (auth: Bs)
Chain Length:251
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:QB (auth: Bt)
Chain Length:259
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:RB (auth: Bu)
Chain Length:189
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:SB (auth: Bv)
Chain Length:221
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:TB (auth: Bw)
Chain Length:174
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:UB (auth: Bx)
Chain Length:51
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:VB (auth: By)
Chain Length:134
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Ribosome-associated protein o
Chain IDs:WB (auth: H1)
Chain Length:284
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Elongation factor 2
Chain IDs:XB (auth: HE)
Chain Length:842
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Eukaryotic translation initia
Chain IDs:AC (auth: HI)
Chain Length:157
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:YB (auth: HL)
Chain Length:216
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:SDO1-like protein C21C3.19
Chain IDs:ZB (auth: HS)
Chain Length:106
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
5CT AC LYS modified residue
Ligand Molecules
ZN
Primary Citation
A novel eukaryotic ribosome factor promotes translation restart after dormancy
To Be Published ? ? ? (?)
Primary Citation of related structures
9PHC
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