9RK9 image
Deposition Date 2025-06-13
Release Date 2026-06-10
Last Version Date 2026-06-10
Entry Detail
PDB ID:
9RK9
Keywords:
Title:
Fervidolysin B (FerB) from Fervidobacterium pennivorans
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.49 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Subtilisin-like serine protea
Gene (Uniprot):Ferpe_1165
Chain IDs:A
Chain Length:97
Number of Molecules:1
Biological Source:Fervidobacterium pennivorans
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Subtilisin-like serine protea
Gene (Uniprot):Ferpe_1165
Chain IDs:B
Chain Length:332
Number of Molecules:1
Biological Source:Fervidobacterium pennivorans
Primary Citation
Structural characterization of an S8 protease from Fervidobacterium pennivorans reveals a unique tyrosine-rich beta-hairpin.
Enzyme.Microb.Technol. 199 110904 110904 (2026)
PMID: 42176613 DOI: 10.1016/j.enzmictec.2026.110904

Abstact

Keratin is an abundant structural fibrous protein and extremely recalcitrant biopolymer. beta-Keratin is the major constituent of feathers, which, due to the widespread poultry industry, has become a major waste product. Biotechnological upcycling of feather waste has gained interest as various bacteria and fungi capable of degrading keratin have been isolated. These microorganisms produce proteases, termed keratinases, responsible for the enzymatic hydrolysis of keratin. The structural properties that confer keratinolytic activity to proteases are, however, not well understood. Here, we investigated the structure-function relationship of a subtilisin-like S8 endopeptidase (FerB) from the thermophile Fervidobacterium pennivorans strain T. FerB was crystallized and its structure solved to 1.5 A resolution, revealing an auto-processed state where the pro-peptide domain is non-covalently attached to the catalytic domain. The carboxyl group of the scissile peptide bond is coordinated in the active site within hydrogen bonding distance of the catalytic triad's serine residue. Unlike fervidolysin, no beta-sandwich domains are present. However, a tyrosine-rich beta-hairpin structure is found in the corresponding position within the FerB structure. Deletion of the beta-hairpin reduced the protein's integrity and keratinase activity.

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Chemical

Disease

Primary Citation of related structures
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