9RA5 image
Deposition Date 2025-05-20
Release Date 2026-06-03
Last Version Date 2026-06-10
Entry Detail
PDB ID:
9RA5
Title:
Respiratory syncytial virus fusion protein N-terminal heptad repeat domain in complex with Double stapled peptide 3/4i
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.63 Å
R-Value Free:
0.20
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 21 3
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fusion glycoprotein F1
Gene (Uniprot):F
Chain IDs:A
Chain Length:53
Number of Molecules:1
Biological Source:Human respiratory syncytial virus A
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Double stapled peptide 3/4i
Chain IDs:B (auth: D)
Chain Length:22
Number of Molecules:1
Biological Source:human respiratory syncytial virus
Primary Citation
Double-Stapled Peptide Scan Yields Potent Fusion Inhibitors of Respiratory Syncytial Virus.
J.Med.Chem. ? ? ? (2026)
PMID: 42203199 DOI: 10.1021/acs.jmedchem.5c02932

Abstact

Respiratory syncytial virus infection (RSV) is a major global health concern, particularly in infants and elderly populations. In this work, we have screened and identified 3 double-stapled peptides derived from a minimal domain of the RSV F heptad repeat, namely 3/4i, 3/4m, and 4/4g, which are potent inhibitors of RSV fusion and remain active against viral escape mutants resistant to small-molecule fusion inhibitors. Our structural activity relationship (SAR) analysis demonstrates that combining a limited set of staples is sufficient to achieve high antiviral potency. X-ray crystallography revealed that the enhanced potency of 3/4i and 3/4m primarily arises from strong hydrophobic interactions between the N-terminal staple and the trimeric HR1 coiled coil of RSV F. In vivo pharmacokinetic, imaging, and feasibility studies in RSV-infected Balb/c mice further support intranasal administration as a promising route for delivering these stapled peptides to the lung, highlighting their potential as therapeutics against RSV.

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Primary Citation of related structures
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