9PY5 image
Deposition Date 2025-08-06
Release Date 2026-06-17
Last Version Date 2026-06-17
Entry Detail
PDB ID:
9PY5
Title:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Q23 NFL TD CC3+ gp140
Chain IDs:A, B, C
Chain Length:648
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Q10M-055 Fab heavy chain
Chain IDs:D (auth: H)
Chain Length:234
Number of Molecules:1
Biological Source:Macaca mulatta
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Q10M-055 Fab light chain
Chain IDs:E (auth: L)
Chain Length:213
Number of Molecules:1
Biological Source:Macaca mulatta
Ligand Molecules
Primary Citation

Abstact

As a chronically replicating virus, HIV has evolved extreme sequence variability and effective shielding of functionally constrained spike protein determinants by host-derived glycans(1). Broadly neutralizing antibodies, although rare, can be isolated from people living with HIV, revealing conserved envelope glycoprotein (Env) sites as key targets for vaccine development(2-4). One such target is the apex of the Env spike. Here we identify a vaccination strategy using heterologous HIV Env trimers covalently coupled to liposomes for multivalent display that resulted in the elicitation of cross-neutralizing HIV serum antibody responses in all trimer-liposome-immunized non-human primates. Critically, we isolated monoclonal antibodies from multiple macaques that cross-neutralize divergent HIV clinical isolates. High-resolution cryogenic electron microscopy structural analyses of monoclonal antibodies from four different macaques demonstrate that they target the Env trimer apex in a manner highly similar to that of the human-infection-elicited, apex-directed broadly neutralizing antibody PG9, representing a substantial advance in HIV vaccine development.

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Primary Citation of related structures
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