9OOK image
Deposition Date 2025-05-15
Release Date 2025-11-05
Last Version Date 2026-02-25
Entry Detail
PDB ID:
9OOK
Title:
Cryo-EM structure of vaccine-elicited antibody T3_QB_G12 in complex with HIV Env trimer Q23-APEX-GT1
Biological Source:
Source Organism(s):
Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T3_QB_G12 heavy chain
Chain IDs:A (auth: H), E (auth: I), I (auth: J)
Chain Length:503
Number of Molecules:3
Biological Source:Mus musculus
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T3_QB_G12 light chain
Chain IDs:B (auth: L), F (auth: M), J (auth: N)
Chain Length:213
Number of Molecules:3
Biological Source:Mus musculus
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV Env gp120
Chain IDs:C (auth: f), G (auth: h), K (auth: j)
Chain Length:503
Number of Molecules:3
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV Env gp41 ectodomain
Chain IDs:D (auth: g), H (auth: i), L (auth: k)
Chain Length:153
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation

Abstact

Current immunization strategies to elicit broadly neutralizing antibodies (bnAbs) against HIV-1 generally propose complex, multiboost regimens. In rhesus macaques, simian-human immunodeficiency virus (SHIV) infection rapidly drives the development of some bnAb classes sharing structural similarities with those in humans. Here, we generated a knockin (KI) mouse model with B cells bearing the unmutated common ancestor of a V2 apex-targeted bnAb lineage, V033-a. A single immunization with a germline-targeting native-like trimer, Q23-APEX-GT1, recapitulated the ontogeny of the mature rhesus bnAb in KI mice, including rare, disfavored somatic mutations. Resulting antibodies exhibited potent neutralization against a broad panel of heterologous HIV-1 strains. Boosting with Env escape mutant trimers further improved breadth and potency, and cryo-electron microscopy analysis revealed the structural basis for heterologous neutralization breadth. Nonhuman primate and mouse models combined with structure can serve as a platform for identifying and validating immunogens that streamline HIV vaccination regimens.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
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