9NVW image
Deposition Date 2025-03-21
Release Date 2026-04-01
Last Version Date 2026-04-29
Entry Detail
PDB ID:
9NVW
Title:
Cryo-EM structure of rhesus antibody CH35-Apex1.08 in complex with HIV Env trimer Q23-APEX-GT2
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CH35-Apex1.08 heavy chain
Chain IDs:A (auth: H)
Chain Length:246
Number of Molecules:1
Biological Source:Macaca mulatta
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CH35-Apex1.08 kappa chain
Chain IDs:B (auth: L)
Chain Length:214
Number of Molecules:1
Biological Source:Macaca mulatta
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV envelope gp120
Gene (Uniprot):env
Chain IDs:C (auth: b), E (auth: d), G (auth: f)
Chain Length:478
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV envelope gp41 ectodomain
Gene (Uniprot):env
Chain IDs:D (auth: c), F (auth: e), H (auth: g)
Chain Length:153
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Ligand Molecules
Primary Citation

Abstact

Germline targeting (GT) is a promising strategy to activate rare broadly neutralizing antibody (bnAb)-producing B cells against HIV, but induction of such responses in outbred animals has not been achieved. Using antibody-guided structure-based design, we engineered a GT HIV trimer immunogen, Q23-APEX-GT2, which primes diverse V2-apex bnAb precursors. Q23-APEX-GT2 efficiently activated rare V2-apex-specific B cells in humanized knockin mice and consistently elicited immunofocused antibody responses in outbred rhesus macaques, priming multiple long heavy-chain complementarity-determining region 3 (CDRH3)-loop bnAb-B cell lineages. Monoclonal antibodies isolated from immunized macaques showed broad heterologous HIV trimer recognition and modest cross-neutralization of diverse tier-2 viruses. Cryoelectron microscopy (cryo-EM) structural studies confirmed precise epitope targeting and revealed CDRH3-mediated binding modes that mirrored those of human V2-apex bnAbs. Together, these findings establish proof of principle for priming and early maturation of authentic V2-apex bnAb precursors in outbred macaques and highlight the promise of V2-apex-targeted HIV vaccines.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
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