9MZ1 image
Deposition Date 2025-01-22
Release Date 2025-12-03
Last Version Date 2026-04-01
Entry Detail
PDB ID:
9MZ1
Keywords:
Title:
Structure of human endothelial nitric oxide synthase heme domain bound with 7-(3-aminomethyl)phenyl-6-fluoro-4-methylquinoin-2-amine
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.05 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nitric oxide synthase, endoth
Gene (Uniprot):NOS3
Chain IDs:A, B, C, D
Chain Length:440
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Enhancement of Potency and Selectivity of 2-Aminoquinoline-Based Human Neuronal Nitric Oxide Synthase Inhibitors.
J. Med. Chem. 69 3779 3795 (2026)
PMID: 41635994 DOI: 10.1021/acs.jmedchem.5c01679

Abstact

Neuronal nitric oxide synthase (nNOS) is a key enzyme in neurodegenerative diseases and melanoma, making it an important therapeutic target. We previously reported 2-aminoquinoline-based nNOS inhibitors with promising activity but limited by suboptimal potency, isoform selectivity, and off-target effects. To address these issues, we designed and synthesized a new series of 7-aryl-6-fluoro-4-methyl-2-aminoquinoline derivatives. Compound 16 showed excellent potency against human nNOS (K(i) 16 nM), with approximately 1800-fold selectivity over human endothelial NOS (eNOS) and approximately 2900-fold over human inducible NOS (iNOS). PAMPA-BBB experiments indicated high effective permeability (P(e) = 13.04 x 10(-6) cm/s), suggesting strong CNS drug potential. In vivo pharmacokinetic studies in mice further demonstrated sustained systemic exposure, low clearance, and robust brain penetration. In contrast, compound 24, the N-Me analogue of 16, was inactive. Molecular dynamics simulations indicated that N-methylation disrupted the favorable solvation of the tail amino group, likely contributing to its loss of activity and nNOS affinity.

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Primary Citation of related structures
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